Mechanisms of protein evolution and their application to protein engineering.

ME Glasner, JA Gerlt, PC Babbitt - Advances in enzymology and …, 2007 - europepmc.org
Protein engineering holds great promise for the development of new biosensors,
diagnostics, therapeutics, and agents for bioremediation. Despite some remarkable …

Menaquinone Biosynthesis in Escherichia coli:  Identification of 2-Succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate as a Novel Intermediate and Re …

M Jiang, Y Cao, ZF Guo, M Chen, X Chen, Z Guo - Biochemistry, 2007 - ACS Publications
Menaquinone is an electron carrier in the respiratory chain of Escherichia coli during
anaerobic growth. Its biosynthesis involves (1 R, 6 R)-2-succinyl-6-hydroxy-2, 4 …

Prediction and assignment of function for a divergent N-succinyl amino acid racemase

L Song, C Kalyanaraman, AA Fedorov… - Nature chemical …, 2007 - nature.com
The protein databases contain many proteins with unknown function. A computational
approach for predicting ligand specificity that requires only the sequence of the unknown …

Probing the Origin of the Compromised Catalysis of E. coli Alkaline Phosphatase in its Promiscuous Sulfatase Reaction

I Catrina, PJ O'Brien, J Purcell… - Journal of the …, 2007 - ACS Publications
The catalytic promiscuity of E. coli alkaline phosphatase (AP) and many other enzymes
provides a unique opportunity to dissect the origin of enzymatic rate enhancements via a …

Stability for Function Trade-Offs in the Enolase Superfamily “Catalytic Module”,

RA Nagatani, A Gonzalez, BK Shoichet, LS Brinen… - Biochemistry, 2007 - ACS Publications
Enzyme catalysis reflects a dynamic interplay between charged and polar active site
residues that facilitate function, stabilize transition states, and maintain overall protein …

Determination of the stereochemistry of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate, a key intermediate in menaquinone biosynthesis

M Jiang, M Chen, Y Cao, Y Yang, KH Sze, X Chen… - Organic …, 2007 - ACS Publications
The turnover product of the committed step of menaquinone biosynthesis was isolated and
determined to be (1 R, 2 S, 5 S, 6 S)-2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 …

Structure of Staphylococcus aureus 1, 4-dihydroxy-2-naphthoyl-CoA synthase (MenB) in complex with acetoacetyl-CoA

V Ulaganathan, MF Agacan, L Buetow… - … Section F: Structural …, 2007 - journals.iucr.org
Vitamin K2, or menaquinone, is an essential cofactor for many organisms and the enzymes
involved in its biosynthesis are potential antimicrobial drug targets. One of these enzymes, 1 …

[PDF][PDF] Non-contact measurement of soil moisture content using thermal infrared sensor and weather variables

T Alshikaili - 2007 - harvest.usask.ca
The use of remote sensing technology has made it possible for the non-contact
measurement of soil moisture content (SMC). Many remote sensing techniques can be used …

[PDF][PDF] Investigation of MosA, a protein implicated in rhizopine Biosynthesis

CP Phenix - 2007 - harvest.usask.ca
MosA is a protein found in Sinorhizobium meliloti L5-30 and has been suggested to be
responsible for the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine (3-MSI) from …

[PDF][PDF] An investigation into catalytic promiscuity in the Enoyl CoA Hydratase/Isomerase superfamily

GS Shackelford - 2007 - escholarship.org
Enzymatic Specificity Enzymes are expected to be specific, though cases have been
identified of enzymes promiscuously catalyzing reactions in addition to their native one …