Rapidly evolving fish genomes and teleost diversity

V Ravi, B Venkatesh - Current opinion in genetics & development, 2008 - Elsevier
Teleost fishes are the largest and most diverse group of vertebrates. The diversity of teleosts
has been attributed to a whole-genome duplication (WGD) event in the ray-finned fish …

Gondwanan break-up: legacies of a lost world?

P Upchurch - Trends in ecology & evolution, 2008 - cell.com
Fierce debate surrounds the history of organisms in the southern hemisphere; did
Gondwanan break-up produce ocean barriers that imposed distribution patterns on …

Strong variations of mitochondrial mutation rate across mammals—the longevity hypothesis

B Nabholz, S Glémin, N Galtier - Molecular biology and …, 2008 - academic.oup.com
Mitochondrial DNA (mtDNA) is the most popular marker of molecular diversity in animals,
primarily because of its elevated mutation rate. After> 20 years of intensive usage, the extent …

MicroRNAs and the advent of vertebrate morphological complexity

AM Heimberg, LF Sempere, VN Moy… - Proceedings of the …, 2008 - National Acad Sciences
The causal basis of vertebrate complexity has been sought in genome duplication events
(GDEs) that occurred during the emergence of vertebrates, but evidence beyond …

The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil records

KJ Peterson, JA Cotton… - … Transactions of the …, 2008 - royalsocietypublishing.org
Unravelling the timing of the metazoan radiation is crucial for elucidating the
macroevolutionary processes associated with the Cambrian explosion. Because estimates …

Rapid development of multiple nuclear loci for phylogenetic analysis using genomic resources: an example from squamate reptiles

TM Townsend, RE Alegre, ST Kelley, JJ Wiens… - Molecular phylogenetics …, 2008 - Elsevier
Recently, as genome-scale data have become available for more organisms, the
development of phylogenetic markers from nuclear protein-coding loci (NPCL) has become …

The effect of inappropriate calibration: three case studies in molecular ecology

SYW Ho, U Saarma, R Barnett, J Haile, B Shapiro - PLoS One, 2008 - journals.plos.org
Time-scales estimated from sequence data play an important role in molecular ecology.
They can be used to draw correlations between evolutionary and palaeoclimatic events, to …

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX

H Nomiyama, K Hieshima, N Osada, Y Kato-Unoki… - BMC genomics, 2008 - Springer
Background The chemokine family plays important roles in cell migration and activation. In
humans, at least 44 members are known. Based on the arrangement of the four conserved …

Mitogenomic relationships of placental mammals and molecular estimates of their divergences

U Arnason, JA Adegoke, A Gullberg, EH Harley… - Gene, 2008 - Elsevier
Molecular analyses of the relationships of placental mammals have shown a progressive
congruence between mitogenomic and nuclear phylogenies. Some inconsistencies have …

Determination of mitochondrial genetic diversity in mammals

B Nabholz, JF Mauffrey, E Bazin, N Galtier, S Glemin - Genetics, 2008 - academic.oup.com
Mitochondrial DNA (mtDNA) is one of the most popular population genetic markers. Its
relevance as an indicator of population size and history has recently been questioned by …