Gene Ontology (GO) analysis has become a commonly used approach for functional studies
of large-scale genomic or transcriptomic data. Although there have been a lot of software …

It has been proposed that one route of behavioral evolution involves novel regulation of
conserved genes. Age-related division of labor in honey bee colonies, a highly derived …

Background Scleractinian corals are the foundation of reef ecosystems in tropical marine
environments. Their great success is due to interactions with endosymbiotic dinoflagellates …

Regulated cell expansion allows plants to adapt their morphogenesis to prevailing
environmental conditions. Cell expansion is driven by turgor pressure created by osmotic …

Genomic scans for selection are a useful tool for identifying genes underlying phenotypic
transitions. In this article, we describe the results of a genome scan designed to identify …

Background The DNA microarray technology allows the measurement of expression levels
of thousands of genes under tens/hundreds of different conditions. In microarray data, genes …

The mammalian Y chromosome is essential for spermatogenesis, which is characterized by
sperm cell differentiation and chromatin condensation for acquisition of correct shape of the …

Background Epimorphic regeneration is the process by which complete regeneration of a
complex structure such as a limb occurs through production of a proliferating blastema. This …

Protein phosphorylation plays important roles in a variety of cellular processes. Detecting
possible phosphorylation sites and their corresponding protein kinases is crucial for …

We present a new version of Babelomics, a complete suite of web tools for the functional
profiling of genome scale experiments, with new and improved methods as well as more …