Is there a molecular key to the level of “biological species” in eukaryotes? A DNA guide
AW Coleman - Molecular phylogenetics and evolution, 2009 - Elsevier
DNA sequences, powerful for phylogeny, have not yet proven as rewarding for taxonomic
categorization purposes. However, further analyses of one locus, the second Internal …
categorization purposes. However, further analyses of one locus, the second Internal …
[HTML][HTML] Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes
Whole genome duplications (WGDs) followed by diploidization, which includes gene loss,
have been an important recurrent process in the evolution of higher eukaryotes. Gene …
have been an important recurrent process in the evolution of higher eukaryotes. Gene …
5.8 S-28S rRNA interaction and HMM-based ITS2 annotation
The internal transcribed spacer 2 (ITS2) of the nuclear ribosomal repeat unit is one of the
most commonly applied phylogenetic markers. It is a fast evolving locus, which makes it …
most commonly applied phylogenetic markers. It is a fast evolving locus, which makes it …
A statistical approach for distinguishing hybridization and incomplete lineage sorting
S Joly, PA McLenachan… - The American …, 2009 - journals.uchicago.edu
The extent and evolutionary significance of hybridization is difficult to evaluate because of
the difficulty in distinguishing hybridization from incomplete lineage sorting. Here we present …
the difficulty in distinguishing hybridization from incomplete lineage sorting. Here we present …
[HTML][HTML] Shape-shifting corals: Molecular markers show morphology is evolutionarily plastic in Porites
Background Corals are notoriously difficult to identify at the species-level due to few
diagnostic characters and variable skeletal morphology. This' coral species problem'is an …
diagnostic characters and variable skeletal morphology. This' coral species problem'is an …
Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae)
ML Aïnouche, PM Fortune, A Salmon, C Parisod… - Biological …, 2009 - Springer
In this paper, we examine how the Spartina system has helped our understanding of the
genomic aspects of allopolyploid speciation in the context of biological invasion. More …
genomic aspects of allopolyploid speciation in the context of biological invasion. More …
DNA barcoding will frequently fail in complicated groups: an example in wild potatoes
DM Spooner - American journal of botany, 2009 - Wiley Online Library
DNA barcoding (“barcoding”) has been proposed as a rapid and practical molecular method
to identify species via diagnostic variation in short orthologous DNA sequences from one or …
to identify species via diagnostic variation in short orthologous DNA sequences from one or …
ITS2 sequence–structure analysis in phylogenetics: a how-to manual for molecular systematics
J Schultz, M Wolf - Molecular phylogenetics and evolution, 2009 - Elsevier
The information that can be obtained from the secondary structure of the nuclear ribosomal
internal transcribed spacer 2 (ITS2) is substantial, and yet many studies exploit this …
internal transcribed spacer 2 (ITS2) is substantial, and yet many studies exploit this …
Tracking the evolutionary history of polyploidy in Fragaria L.(strawberry): new insights from phylogenetic analyses of low-copy nuclear genes
M Rousseau-Gueutin, A Gaston, A Aïnouche… - Molecular phylogenetics …, 2009 - Elsevier
Phylogenetic utility of two nuclear genes (GBSSI-2 and DHAR) was explored in genus
Fragaria in order to clarify phylogenetic relationships among taxa and to elucidate the origin …
Fragaria in order to clarify phylogenetic relationships among taxa and to elucidate the origin …
Plant DNA barcodes and species resolution in sedges (Carex, Cyperaceae)
JR Starr, RFC Naczi… - Molecular ecology …, 2009 - Wiley Online Library
We investigate the species discriminatory power of a subset of the proposed plant barcoding
loci (matK, rbcL, rpoC1, rpoB, trnH‐psbA) in Carex, a cosmopolitan genus that represents …
loci (matK, rbcL, rpoC1, rpoB, trnH‐psbA) in Carex, a cosmopolitan genus that represents …