[HTML][HTML] Gene set analysis of genome-wide association studies: methodological issues and perspectives

L Wang, P Jia, RD Wolfinger, X Chen, Z Zhao - Genomics, 2011 - Elsevier
Recent studies have demonstrated that gene set analysis, which tests disease association
with genetic variants in a group of functionally related genes, is a promising approach for …

[HTML][HTML] Gene set analysis of SNP data: benefits, challenges, and future directions

BL Fridley, JM Biernacka - European Journal of Human Genetics, 2011 - nature.com
The last decade of human genetic research witnessed the completion of hundreds of
genome-wide association studies (GWASs). However, the genetic variants discovered …

[HTML][HTML] Identification, replication, and functional fine-mapping of expression quantitative trait loci in primary human liver tissue

F Innocenti, GM Cooper, IB Stanaway… - PLoS …, 2011 - journals.plos.org
The discovery of expression quantitative trait loci (“eQTLs”) can help to unravel genetic
contributions to complex traits. We identified genetic determinants of human liver gene …

Genome-wide meta-analysis for severe diabetic retinopathy

MA Grassi, A Tikhomirov, S Ramalingam… - Human molecular …, 2011 - academic.oup.com
Diabetic retinopathy is a leading cause of blindness. The purpose of this study is to identify
novel genetic loci associated with the sight threatening complications of diabetic retinopathy …

[HTML][HTML] Genome-wide association and meta-analysis in populations from Starr County, Texas, and Mexico City identify type 2 diabetes susceptibility loci and …

JE Below, ER Gamazon, JV Morrison, A Konkashbaev… - Diabetologia, 2011 - Springer
Aims/hypothesis We conducted genome-wide association studies (GWASs) and expression
quantitative trait loci (eQTL) analyses to identify and characterise risk loci for type 2 diabetes …

Molecular basis of obesity: current status and future prospects

H Choquet, D Meyre - Current genomics, 2011 - ingentaconnect.com
Obesity is a global health problem that is gradually affecting each continent of the world.
Obesity is a heterogeneous disorder, and the biological causes of obesity are complex. The …

A combined analysis of genome-wide association studies in breast cancer

J Li, K Humphreys, T Heikkinen, K Aittomäki… - Breast cancer research …, 2011 - Springer
In an attempt to identify common disease susceptibility alleles for breast cancer, we
performed a combined analysis of three genome-wide association studies (GWAS) …

Using biological knowledge to uncover the mystery in the search for epistasis in genome‐wide association studies

MD Ritchie - Annals of human genetics, 2011 - Wiley Online Library
The search for the missing heritability in genome‐wide association studies (GWAS) has
become an important focus for the human genetics community. One suspected location of …

[HTML][HTML] Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development

AG Brisbin, YW Asmann, H Song, YY Tsai… - BMC medical …, 2011 - Springer
Background Human chromosomal region 8q24 contains several genes which could be
functionally related to cancer, including the proto-oncogene c-MYC. However, the …

[HTML][HTML] A study of CNVs as trait-associated polymorphisms and as expression quantitative trait loci

ER Gamazon, DL Nicolae, NJ Cox - PLoS genetics, 2011 - journals.plos.org
We conducted a comprehensive study of copy number variants (CNVs) well-tagged by SNPs
(r2≥ 0.8) by analyzing their effect on gene expression and their association with disease …