Comparative studies of gene expression and the evolution of gene regulation

IG Romero, I Ruvinsky, Y Gilad - Nature Reviews Genetics, 2012 - nature.com
The hypothesis that differences in gene regulation have an important role in speciation and
adaptation is more than 40 years old. With the advent of new sequencing technologies, we …

Human pigmentation genes under environmental selection

RA Sturm, DL Duffy - Genome biology, 2012 - Springer
Genome-wide association studies and comparative genomics have established major loci
and specific polymorphisms affecting human skin, hair and eye color. Environmental …

A map of rice genome variation reveals the origin of cultivated rice

X Huang, N Kurata, X Wei, ZX Wang, A Wang, Q Zhao… - Nature, 2012 - nature.com
Crop domestications are long-term selection experiments that have greatly advanced
human civilization. The domestication of cultivated rice (Oryza sativa L.) ranks as one of the …

A linear complexity phasing method for thousands of genomes

O Delaneau, J Marchini, JF Zagury - Nature methods, 2012 - nature.com
Human-disease etiology can be better understood with phase information about diploid
sequences. We present a method for estimating haplotypes, using genotype data from …

A systematic survey of loss-of-function variants in human protein-coding genes

DG MacArthur, S Balasubramanian, A Frankish… - Science, 2012 - science.org
Genome-sequencing studies indicate that all humans carry many genetic variants predicted
to cause loss of function (LoF) of protein-coding genes, suggesting unexpected redundancy …

[HTML][HTML] Genomic patterns of homozygosity in worldwide human populations

TJ Pemberton, D Absher, MW Feldman… - The American Journal of …, 2012 - cell.com
Genome-wide patterns of homozygosity runs and their variation across individuals provide a
valuable and often untapped resource for studying human genetic diversity and evolutionary …

A major genome region underlying artemisinin resistance in malaria

IH Cheeseman, BA Miller, S Nair, S Nkhoma, A Tan… - science, 2012 - science.org
Evolving resistance to artemisinin-based compounds threatens to derail attempts to control
malaria. Resistance has been confirmed in western Cambodia and has recently emerged in …

Evidence of widespread selection on standing variation in Europe at height-associated SNPs

MC Turchin, CWK Chiang, CD Palmer… - Nature …, 2012 - nature.com
Strong signatures of positive selection at newly arising genetic variants are well documented
in humans,,,,,,,, but this form of selection may not be widespread in recent human evolution …

Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition

MH Moradi, A Nejati-Javaremi, M Moradi-Shahrbabak… - BMC genetics, 2012 - Springer
Background Identification of genomic regions that have been targets of selection for
phenotypic traits is one of the most important and challenging areas of research in animal …

Genes, culture, and agriculture: An example of human niche construction

MJ O'Brien, KN Laland - Current Anthropology, 2012 - journals.uchicago.edu
Theory and empirical data from a variety of disciplines strongly imply that recent human
history involves extensive gene-culture coevolution, much of it as a direct result of human …