Background In the postgenome era, a prediction of response to treatment could lead to
better dose selection for patients in radiotherapy. To identify a radiosensitive gene signature …

Background Genomic datasets generated by new technologies are increasingly prevalent in
disparate areas of biological research. While many studies have sought to characterize …

Transcriptomic profiling experiments that aim to the identification of responsive genes in
specific biological conditions are commonly set up under defined experimental designs that …

Background Batch effects due to sample preparation or array variation (type, charge, and/or
platform) may influence the results of microarray experiments and thus mask and/or …

Shotgun proteomics has become the standard proteomics technique for the large-scale
measurement of protein abundances in biological samples. Despite quantitative proteomics …

Glioblastoma Multiforme (GBM) is a tumor with high mortality and no known cure. The
dramatic molecular and clinical heterogeneity seen in this tumor has led to attempts to …

Results Although six cytokines (IL-1β, IL-6, TNF-α, IL-4, GM-CSF, and monocyte
chemoattractant protein-1) distinguished acute rejectors in the training cohort, logistic …

Measurements from microarrays and other high-throughput technologies are susceptible to
non-biological artifacts like batch effects. It is known that batch effects can alter or obscure …

SYBR® Green qPCR methods for the detection of the Roundup Ready®“CP4-EPSPS”,
LibertyLink®“PAT” and “BAR,” and the Bacillus thuringiensis “CryIAb” traits as present in …

Recent advances in high-throughput biotechnologies have led to the rapid growing research
interest in reverse engineering of biomolecular systems (REBMS).'Data-driven'approaches …