Environmental epigenetics: prospects for studying epigenetic mediation of exposure–response relationships

VK Cortessis, DC Thomas, AJ Levine, CV Breton… - Human genetics, 2012 - Springer
Abstract Changes in epigenetic marks such as DNA methylation and histone acetylation are
associated with a broad range of disease traits, including cancer, asthma, metabolic …

[HTML][HTML] Epigenetics of the male gamete

DT Carrell - Fertility and sterility, 2012 - Elsevier
OBJECTIVE: To review and summarize the current understanding of the epigenetic status of
human sperm in regards to protamination, specific localization and modifications of retained …

Widespread plasticity in CTCF occupancy linked to DNA methylation

H Wang, MT Maurano, H Qu, KE Varley, J Gertz… - Genome …, 2012 - genome.cshlp.org
CTCF is a ubiquitously expressed regulator of fundamental genomic processes including
transcription, intra-and interchromosomal interactions, and chromatin structure. Because of …

Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues

G Landan, NM Cohen, Z Mukamel, A Bar… - Nature …, 2012 - nature.com
DNA methylation has been comprehensively profiled in normal and cancer cells, but the
dynamics that form, maintain and reprogram differentially methylated regions remain …

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data

Y Liu, KD Siegmund, PW Laird, BP Berman - Genome biology, 2012 - Springer
Bisulfite treatment of DNA followed by high-throughput sequencing (Bisulfite-seq) is an
important method for studying DNA methylation and epigenetic gene regulation, yet current …

[HTML][HTML] Regulated noise in the epigenetic landscape of development and disease

E Pujadas, AP Feinberg - Cell, 2012 - cell.com
In this Perspective, we synthesize past and present observations in the field of epigenetics to
propose a model in which the epigenome can modulate cellular plasticity in development …

Mechanisms of DNA methylation and demethylation in mammals

G Auclair, M Weber - Biochimie, 2012 - Elsevier
Cytosine methylation is an epigenetically propagated DNA modification that can modify how
the DNA molecule is recognized and expressed. DNA methylation undergoes extensive …

The KRAB-ZFP/KAP1 system contributes to the early embryonic establishment of site-specific DNA methylation patterns maintained during development

S Quenneville, P Turelli, K Bojkowska, C Raclot… - Cell reports, 2012 - cell.com
De novo DNA methylation is an essential aspect of the epigenetic reprogramming that takes
place during early development, yet factors responsible for its instatement at particular …

Stress-induced chromatin changes: a critical view on their heritability

A Pecinka, O Mittelsten Scheid - Plant and Cell Physiology, 2012 - academic.oup.com
The investigation of stress responses has been a focus of plant research, breeding and
biotechnology for a long time. Insight into stress perception, signaling and genetic …

Prenatal Famine and Genetic Variation Are Independently and Additively Associated with DNA Methylation at Regulatory Loci within IGF2/H19

EW Tobi, PE Slagboom, J Van Dongen, D Kremer… - PloS one, 2012 - journals.plos.org
Both the early environment and genetic variation may affect DNA methylation, which is one
of the major molecular marks of the epigenome. The combined effect of these factors on a …