Beyond GWASs: illuminating the dark road from association to function
Genome-wide association studies (GWASs) have enabled the discovery of common genetic
variation contributing to normal and pathological traits and clinical drug responses, but …
variation contributing to normal and pathological traits and clinical drug responses, but …
The continuum of cancer immunosurveillance: prognostic, predictive, and mechanistic signatures
J Galon, HK Angell, D Bedognetti, FM Marincola - Immunity, 2013 - cell.com
Numerous analyses of large patient cohorts identified specific patterns of immune activation
associated with patient survival. We established these as the immune contexture …
associated with patient survival. We established these as the immune contexture …
Analysis of circulating tumor DNA to monitor metastatic breast cancer
Background The management of metastatic breast cancer requires monitoring of the tumor
burden to determine the response to treatment, and improved biomarkers are needed …
burden to determine the response to treatment, and improved biomarkers are needed …
Correlating transcriptional networks to breast cancer survival: a large-scale coexpression analysis
Weighted gene coexpression network analysis (WGCNA) is a powerful 'guilt-by-association'-
based method to extract coexpressed groups of genes from large heterogeneous …
based method to extract coexpressed groups of genes from large heterogeneous …
Pattern discovery and cancer gene identification in integrated cancer genomic data
Large-scale integrated cancer genome characterization efforts including the cancer genome
atlas and the cancer cell line encyclopedia have created unprecedented opportunities to …
atlas and the cancer cell line encyclopedia have created unprecedented opportunities to …
Protein phosphatase 2A: a target for anticancer therapy
D Perrotti, P Neviani - The lancet oncology, 2013 - thelancet.com
Summary Protein phosphatase 2A (PP2A), one of the main serine–threonine phosphatases
in mammalian cells, maintains cell homoeostasis by counteracting most of the kinase-driven …
in mammalian cells, maintains cell homoeostasis by counteracting most of the kinase-driven …
Growth of triple-negative breast cancer cells relies upon coordinate autocrine expression of the proinflammatory cytokines IL-6 and IL-8
ZC Hartman, GM Poage, P Den Hollander, A Tsimelzon… - Cancer research, 2013 - AACR
Triple-negative breast cancers (TNBC) are aggressive with no effective targeted therapies. A
combined database analysis identified 32 inflammation-related genes differentially …
combined database analysis identified 32 inflammation-related genes differentially …
The shaping and functional consequences of the microRNA landscape in breast cancer
MicroRNAs (miRNAs) show differential expression across breast cancer subtypes, and have
both oncogenic and tumour-suppressive roles,,,,,. Here we report the miRNA expression …
both oncogenic and tumour-suppressive roles,,,,,. Here we report the miRNA expression …
Predicting outcomes in radiation oncology—multifactorial decision support systems
P Lambin, RGPM Van Stiphout… - Nature reviews Clinical …, 2013 - nature.com
With the emergence of individualized medicine and the increasing amount and complexity of
available medical data, a growing need exists for the development of clinical decision …
available medical data, a growing need exists for the development of clinical decision …
Cancer genetics and genomics of human FOX family genes
M Katoh, M Igarashi, H Fukuda, H Nakagama, M Katoh - Cancer letters, 2013 - Elsevier
Forkhead-box (FOX) family proteins, involved in cell growth and differentiation as well as
embryogenesis and longevity, are DNA-binding proteins regulating transcription and DNA …
embryogenesis and longevity, are DNA-binding proteins regulating transcription and DNA …