The Galaxy Project offers the popular web browser-based platform Galaxy for running
bioinformatics tools and constructing simple workflows. Here, we present a broad collection …

Abstract The Cancer Genome Atlas Pan-Cancer Analysis Working Group collaborated on
the Synapse software platform to share and evolve data, results and methodologies while …

Background Provenance is a critical ingredient for establishing trust of published scientific
content. This is true whether we are considering a data set, a computational workflow, a peer …

Reduced costs and increased speed and accuracy of sequencing can bring the genome-
based evaluation of individual disease risk to the bedside. While past efforts have identified …

Data analysis workflows are often composed by many concurrent and compute-intensive
tasks that can be efficiently executed only on scalable computing infrastructures, such as …

Background Genome-wide association studies (GWAS) have identified many common
single nucleotide polymorphisms (SNPs) that associate with clinical phenotypes, but these …

Researchers are often on the move, say at conferences or projects meetings, and as
workflows are becoming ubiquitous in the scientific process, having access to scientific …

Abstract Sprints, Hackathons and Codefests are all names used for informal software
developer meetings, especially popular in open source communities. These meetings, along …

Our goal is to develop workflows for simulating arbitrary collections of mononucleosomes in
atomic detail as an on demand analysis tool for online comparative genomics. The limiting …

Developing software to undertake complex, compute-intensive scientific processes requires
a challenging combination of both specialist domain knowledge and software development …