Drugging the undruggable RAS: Mission possible?

AD Cox, SW Fesik, AC Kimmelman, J Luo… - Nature reviews Drug …, 2014 - nature.com
Despite more than three decades of intensive effort, no effective pharmacological inhibitors
of the RAS oncoproteins have reached the clinic, prompting the widely held perception that …

[HTML][HTML] Mutational signatures: the patterns of somatic mutations hidden in cancer genomes

LB Alexandrov, MR Stratton - Current opinion in genetics & development, 2014 - Elsevier
All cancers originate from a single cell that starts to behave abnormally due to the acquired
somatic mutations in its genome. Until recently, the knowledge of the mutational processes …

The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma

Nature genetics, 2014 - nature.com
Pediatric high-grade glioma (HGG) is a devastating disease with a less than 20% survival
rate 2 years after diagnosis. We analyzed 127 pediatric HGGs, including diffuse intrinsic …

[PDF][PDF] Genome sequencing of SHH medulloblastoma predicts genotype-related response to smoothened inhibition

M Kool, DTW Jones, N Jäger, PA Northcott, TJ Pugh… - Cancer cell, 2014 - cell.com
Smoothened (SMO) inhibitors recently entered clinical trials for sonic-hedgehog-driven
medulloblastoma (SHH-MB). Clinical response is highly variable. To understand the …

Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma

PA Northcott, C Lee, T Zichner, AM Stütz, S Erkek… - Nature, 2014 - nature.com
Medulloblastoma is a highly malignant paediatric brain tumour currently treated with a
combination of surgery, radiation and chemotherapy, posing a considerable burden of …

Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls

JM Zook, B Chapman, J Wang, D Mittelman… - Nature …, 2014 - nature.com
Clinical adoption of human genome sequencing requires methods that output genotypes
with known accuracy at millions or billions of positions across a genome. Because of …

Epigenomic alterations define lethal CIMP-positive ependymomas of infancy

SC Mack, H Witt, RM Piro, L Gu, S Zuyderduyn… - Nature, 2014 - nature.com
Ependymomas are common childhood brain tumours that occur throughout the nervous
system, but are most common in the paediatric hindbrain. Current standard therapy …

Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing

V Hovestadt, DTW Jones, S Picelli, W Wang, M Kool… - Nature, 2014 - nature.com
Epigenetic alterations, that is, disruption of DNA methylation and chromatin architecture, are
now acknowledged as a universal feature of tumorigenesis. Medulloblastoma, a clinically …

Cytogenetic prognostication within medulloblastoma subgroups

DJH Shih, PA Northcott, M Remke… - Journal of clinical …, 2014 - ascopubs.org
Purpose Medulloblastoma comprises four distinct molecular subgroups: WNT, SHH, Group
3, and Group 4. Current medulloblastoma protocols stratify patients based on clinical …

X chromosome regulation: diverse patterns in development, tissues and disease

X Deng, JB Berletch, DK Nguyen… - Nature Reviews …, 2014 - nature.com
Genes on the mammalian X chromosome are present in one copy in males and two copies
in females. The complex mechanisms that regulate the X chromosome lead to evolutionary …