Polyploidy and genome evolution in plants

PS Soltis, DB Marchant, Y Van de Peer… - Current opinion in …, 2015 - Elsevier
Plant genomes vary in size and complexity, fueled in part by processes of whole-genome
duplication (WGD; polyploidy) and subsequent genome evolution. Despite repeated …

Review of potato molecular markers to enhance trait selection

AP Ramakrishnan, CE Ritland… - American journal of …, 2015 - Springer
Noncommercial varieties of potatoes (Solanum tuberosum L.) harbor genetic potential for
improvements of disease resistance and abiotic stress tolerance in commercial potato …

Species-Level Phylogeny and Polyploid Relationships in Hordeum (Poaceae) Inferred by Next-Generation Sequencing and In Silico Cloning of Multiple Nuclear Loci

J Brassac, FR Blattner - Systematic biology, 2015 - academic.oup.com
Polyploidization is an important speciation mechanism in the barley genus Hordeum. To
analyze evolutionary changes after allopolyploidization, knowledge of parental relationships …

Speciation by genome duplication: Repeated origins and genomic composition of the recently formed allopolyploid species Mimulus peregrinus

M Vallejo-Marín, RJA Buggs, AM Cooley, JR Puzey - Evolution, 2015 - academic.oup.com
Whole genome duplication (polyploidization) is a mechanism of “instantaneous” species
formation that has played a major role in the evolutionary history of plants. Much of what we …

Current status and prospects for the study of Nicotiana genomics, genetics, and nicotine biosynthesis genes

X Wang, JL Bennetzen - Molecular Genetics and Genomics, 2015 - Springer
Nicotiana, a member of the Solanaceae family, is one of the most important research model
plants, and of high agricultural and economic value worldwide. To better understand the …

[PDF][PDF] Utility of transcriptome sequencing for phylogenetic inference and character evolution

J Wen, AN Egan, RB Dikow… - … -generation sequencing in …, 2015 - repository.si.edu
Transcriptome sequencing or RNA-Seq is one of the most efficient and cost-effective
methods currently available for gene discovery in non-model organisms. Recent studies …

[HTML][HTML] Cytonuclear Coordination Is Not Immediate upon Allopolyploid Formation in Tragopogon miscellus (Asteraceae) Allopolyploids

T Sehrish, VV Symonds, DE Soltis, PS Soltis, JA Tate - PLoS One, 2015 - journals.plos.org
Allopolyploids, formed by hybridization and chromosome doubling, face the immediate
challenge of having duplicated nuclear genomes that interact with the haploid and …

Molecular cytogenetic insights into the evolution of the epiphytic genus Lepismium (Cactaceae) and related genera

NC Moreno, LD Amarilla, ML Las Peñas… - Botanical Journal of …, 2015 - academic.oup.com
Abstract Changes in chromosome structure and number play an important role in plant
evolution. This was investigated in the Neotropical epiphytic cacti: all Lepismium spp. and …

[HTML][HTML] HyLiTE: accurate and flexible analysis of gene expression in hybrid and allopolyploid species

W Duchemin, PY Dupont, MA Campbell, ARD Ganley… - BMC …, 2015 - Springer
Background Forming a new species through the merger of two or more divergent parent
species is increasingly seen as a key phenomenon in the evolution of many biological …

Multiple lines of evidence clarify limits of Allocasuarina thalassoscopica, A. defungens and A. littoralis (Allocasuarina sect. Cylindropitys, Casuarinaceae)

PF Rose, KL Wilson, IRH Telford… - Australian Systematic …, 2015 - CSIRO Publishing
Uncertainty in identifying Allocasuarina shrubs of the North Coast botanical region of New
South Wales and south-eastern Queensland prompted investigation of species limits using …