Recent advances in molecular marker techniques: insight into QTL mapping, GWAS and genomic selection in plants

SM Zargar, B Raatz, H Sonah, MuslimaNazir… - Journal of crop science …, 2015 - Springer
Recent advances in sequencing technology have brought several novel platforms for marker
development and subsequent genotyping. The high-throughput and cost effective marker …

Fine-mapping of a major QTL controlling angular leaf spot resistance in common bean (Phaseolus vulgaris L.)

B Keller, C Manzanares, C Jara, JD Lobaton… - Theoretical and Applied …, 2015 - Springer
Key message A major QTL for angular leaf spot resistance in the common bean accession
G5686 was fine-mapped to a region containing 36 candidate genes. Markers have been …

SNP E4-205 C/T in C-type lectin of Portunus trituberculatus is association with susceptibility/resistance to Vibrio alginolyticus challenge

G Hao, F Lin, C Mu, R Li, J Yao, X Yuan, X Pan, J Shen… - Aquaculture, 2015 - Elsevier
C-type lectins play an important role in innate immunity of invertebrates, especially in
defending them against bacterial pathogens. In this study, the full-length genomic DNA of C …

Variant of BCL3 gene is strongly associated with five-year survival of non-small-cell lung cancer patients

FID Dimitrakopoulos, AG Antonacopoulou, A Kottorou… - Lung cancer, 2015 - Elsevier
Objectives BCL3, a known atypical IκB family member, has been documented to be
upregulated in hematological malignancies and in some solid tumors, functioning as a …

PPARD rs2016520 polymorphism and circulating lipid levels connect with brain diseases in Han Chinese and suggest sex-dependent effects

Y Huang, S Nie, S Zhou, K Li, J Sun, J Zhao… - Biomedicine & …, 2015 - Elsevier
The PPARD polymorphisms were shown to be associated with circulating lipoprotein
metabolism in various diseases. We aimed to check the contribution of PPARD rs2016520 …

DNA repair gene polymorphisms in B cell non-Hodgkin's lymphoma

A Bahceci, S Paydas, K Tanriverdi, M Ergin… - Tumor Biology, 2015 - Springer
Cancer is a group of diseases characterized by DNA injury, and genetic and environmental
factors are important in the etiology of the cancers. It is well known that there are association …

Identification of sixteen single-nucleotide polymorphism markers in the pearl oyster, Pinctada fucata, for population genetic structure analysis

X Huang, S Wu, Y Guan, Y Li, M He - Journal of genetics, 2015 - Springer
Materials and methods The UniGene sequences which were obtained from high-throughput
sequencing of cDNA library constructed by our research group were screened for SNP using …

Modified low cost SNP genotyping technique using cycle threshold (Ct) & melting temperature (Tm) values in allele specific real-time PCR

DBB Dhas, AH Ashmi, BV Bhat, SC Parija… - Indian Journal of …, 2015 - journals.lww.com
Methods: Two SNPs, rs3014866 and rs2149356 were analysed using allele-specific real-
time PCR. The polymerase chain reaction was carried out using RealQ PCR master mix …

[PDF][PDF] Positive association between PPARD rs2016520 polymorphism and coronary heart disease in a Han Chinese population

HD Ye, YR Li, QX Hong, AN Zhou, QL Zhao, LM Xu… - Genet. Mol …, 2015 - academia.edu
PPARD encodes peroxisome proliferator-activated receptor delta, which has been shown to
play an important role in controlling lipid metabolism and atherosclerosis. In this case …

A lack of association between the IKZF2 rs12619285 polymorphism and coronary heart disease

H Ye, Q Hong, Y Li, X Xu, YI Huang… - Experimental and …, 2015 - spandidos-publications.com
The IKZF2 rs12619285 polymorphism is associated with the eosinophil count, which has
multidimensional functions in the pathogenesis of coronary heart disease (CHD). The aim of …