Integrating motif, DNA accessibility and gene expression data to build regulatory maps in an organism

C Blatti, M Kazemian, S Wolfe, M Brodsky… - Nucleic acids …, 2015 - academic.oup.com
Abstract Characterization of cell type specific regulatory networks and elements is a major
challenge in genomics, and emerging strategies frequently employ high-throughput genome …

Comparative analysis of anti-viral transcriptomics reveals novel effects of influenza immune antagonism

J Thakar, BM Hartmann, N Marjanovic, SC Sealfon… - BMC immunology, 2015 - Springer
Background Comparative analysis of genome-wide expression profiles are increasingly
being used to study virus-specific host interactions. In order to gain mechanistic insights …

[图书][B] Understanding co-expressed gene sets by identifying regulators and modeling genomic elements

CA Blatti III - 2015 - search.proquest.com
Genomic researchers commonly study complex phenotypes by identifying experimentally
derived sets of functionally related genes with similar transcriptional profiles. These gene …

[PDF][PDF] NAR Breakthrough Article Integrating motif, DNA accessibility and gene

C Blatti, M Kazemian, S Wolfe… - Nucleic Acids …, 2015 - pdfs.semanticscholar.org
Characterization of cell type specific regulatory networks and elements is a major challenge
in genomics, and emerging strategies frequently employ high-throughput genome-wide …