Yak whole-genome resequencing reveals domestication signatures and prehistoric population expansions
Yak domestication represents an important episode in the early human occupation of the
high-altitude Qinghai-Tibet Plateau (QTP). The precise timing of domestication is debated …
high-altitude Qinghai-Tibet Plateau (QTP). The precise timing of domestication is debated …
Genome-wide study of structural variants in bovine Holstein, Montbéliarde and Normande dairy breeds
High-throughput sequencing technologies have offered in recent years new opportunities to
study genome variations. These studies have mostly focused on single nucleotide …
study genome variations. These studies have mostly focused on single nucleotide …
[HTML][HTML] Whole-genome resequencing analysis of Hanwoo and Yanbian cattle to identify genome-wide SNPs and signatures of selection
JW Choi, BH Choi, SH Lee, SS Lee, HC Kim, D Yu… - Molecules and cells, 2015 - Elsevier
Over the last 30 years, Hanwoo has been selectively bred to improve economically
important traits. Hanwoo is currently the representative Korean native beef cattle breed, and …
important traits. Hanwoo is currently the representative Korean native beef cattle breed, and …
Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes
Background Over the last few years, continuous development of high-throughput
sequencing platforms and sequence analysis tools has facilitated reliable identification and …
sequencing platforms and sequence analysis tools has facilitated reliable identification and …
Single nucleotide variant detection in Jaffrabadi buffalo (Bubalus bubalis) using high-throughput targeted sequencing
MR Upadhyay, AB Patel, RB Subramanian… - Frontiers in Life …, 2015 - Taylor & Francis
The water buffalo is among the most important livestock species of southern Asia,
contributing greatly to the ecosystem and rural livelihood of the region. The identification of …
contributing greatly to the ecosystem and rural livelihood of the region. The identification of …
Perfect hashing structures for parallel similarity searches
TT Tran, M Giraud, JS Varré - 2015 IEEE International Parallel …, 2015 - ieeexplore.ieee.org
Seed-based heuristics have proved to be efficient for studying similarity between genetic
databases with billions of base pairs. This paper focuses on algorithms and data structures …
databases with billions of base pairs. This paper focuses on algorithms and data structures …
[PDF][PDF] Biological effects of the growth hormone gene polymorphism in the American mink (Neovison vison Schreb., 1777)-does synonymous always mean silent?
JJ Skorupski, M Kmiec - JAPS: Journal of Animal & Plant Sciences, 2015 - academia.edu
Most often, genetic variation causing phenotypical changes is calculated exclusively upon
the occurrence of nonsynonymous variation. However, it has been increasingly more …
the occurrence of nonsynonymous variation. However, it has been increasingly more …
Adaptive divergence in the bovine genome
W Barendse, S McWilliam, RJ Bunch, BE Harrison - bioRxiv, 2015 - biorxiv.org
Cattle diverged during the Pleistocene into two subspecies, one in temperate and one in
tropical environments. Here we have used next generation sequencing of the indicine …
tropical environments. Here we have used next generation sequencing of the indicine …
Die Analyse von genomweiten Re-Sequenzierungsdaten zur Identifizierung kausaler DNA-Variation beim Rind
S Kipp - 2015 - mediatum.ub.tum.de
Ziel dieser Arbeit war die Genom-Re-Sequenzierung von Gründertieren verschiedener
Rinderpopulationen und die damit verbundene zuverlässige Aufdeckung der genomischen …
Rinderpopulationen und die damit verbundene zuverlässige Aufdeckung der genomischen …
[PDF][PDF] Framework for High-Throughput Identification of Genomic Variants in Buffaloes
AB Patel, H Padh, CG Joshi, RB Subramanian - researchgate.net
The genetic improvement in livestock can be achieved through, i) selection and/through, ii)
cross breeding. Conventional selection requires long time span and accurate performance …
cross breeding. Conventional selection requires long time span and accurate performance …