Metabolic network modeling of microbial interactions in natural and engineered environmental systems
We review approaches to characterize metabolic interactions within microbial communities
using Stoichiometric Metabolic Network (SMN) models for applications in environmental and …
using Stoichiometric Metabolic Network (SMN) models for applications in environmental and …
Metabolite concentrations, fluxes and free energies imply efficient enzyme usage
In metabolism, available free energy is limited and must be divided across pathway steps to
maintain a negative Δ G throughout. For each reaction, Δ G is log proportional both to a …
maintain a negative Δ G throughout. For each reaction, Δ G is log proportional both to a …
[图书][B] Systems biology: a textbook
This advanced textbook is tailored for an introductory course in Systems Biology and is well-
suited for biologists as well as engineers and computer scientists. It comes with student …
suited for biologists as well as engineers and computer scientists. It comes with student …
Metabolite damage and metabolite damage control in plants
It is increasingly clear that (a) many metabolites undergo spontaneous or enzyme-catalyzed
side reactions in vivo,(b) the damaged metabolites formed by these reactions can be …
side reactions in vivo,(b) the damaged metabolites formed by these reactions can be …
Identification of metabolic engineering targets for the enhancement of 1, 4-butanediol production in recombinant E. coli using large-scale kinetic models
Rational metabolic engineering methods are increasingly employed in designing the
commercially viable processes for the production of chemicals relevant to pharmaceutical …
commercially viable processes for the production of chemicals relevant to pharmaceutical …
[HTML][HTML] Dynamics of benzoate metabolism in Pseudomonas putida KT2440
S Sudarsan, LM Blank, A Dietrich, O Vielhauer… - Metabolic Engineering …, 2016 - Elsevier
Soil microorganisms mineralize lignin-derived aromatic carbon sources using oxidative
catabolic pathways, such as the β-ketoadipate pathway. Although this aromatic pathway is …
catabolic pathways, such as the β-ketoadipate pathway. Although this aromatic pathway is …
Thermodynamics of the alanine aminotransferase reaction
M Voges, F Schmidt, D Wolff, G Sadowski, C Held - Fluid Phase Equilibria, 2016 - Elsevier
The thermodynamic equilibrium of the aminotransferase reaction from l-alanine and 2-
oxoglutarate to l-glutamate and pyruvate in aqueous solution was investigated in a …
oxoglutarate to l-glutamate and pyruvate in aqueous solution was investigated in a …
[图书][B] Industrial biotechnology: microorganisms
The latest volume in the Advanced Biotechnology series provides an overview of the main
production hosts and platform organisms used today as well as promising future cell …
production hosts and platform organisms used today as well as promising future cell …
Nicotinamide cofactor ratios in engineered strains of Clostridium thermocellum and Thermoanaerobacterium saccharolyticum
Clostridium thermocellum and Thermoanaerobacterium saccharolyticum are bacteria under
investigation for production of biofuels from plant biomass. Thermoanaerobacterium …
investigation for production of biofuels from plant biomass. Thermoanaerobacterium …
Assessment of nitric oxide (NO) redox reactions contribution to nitrous oxide (N2O) formation during nitrification using a multispecies metabolic network model
O Perez‐Garcia, K Chandran… - Biotechnology and …, 2016 - Wiley Online Library
Over the coming decades nitrous oxide (N2O) is expected to become a dominant
greenhouse gas and atmospheric ozone depleting substance. In wastewater treatment …
greenhouse gas and atmospheric ozone depleting substance. In wastewater treatment …