Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database

GL Winsor, EJ Griffiths, R Lo, BK Dhillon… - Nucleic acids …, 2016 - academic.oup.com
Abstract The Pseudomonas Genome Database (http://www. pseudomonas. com) is well
known for the application of community-based annotation approaches for producing a high …

Comparative analysis of the volatile metabolomes of Pseudomonas aeruginosa clinical isolates

HD Bean, CA Rees, JE Hill - Journal of breath research, 2016 - iopscience.iop.org
Pseudomonas aeruginosa is a nearly ubiquitous Gram-negative organism, well known to
occupy a multitude of environmental niches and cause human infections at a variety of …

Phenotype and toxicity of the recently discovered exlA‐positive Pseudomonas aeruginosa strains collected worldwide

E Reboud, S Elsen, S Bouillot… - Environmental …, 2016 - Wiley Online Library
We recently identified a hypervirulent strain of Pseudomonas aeruginosa, differing
significantly from the classical strains in that it lacks the type 3 secretion system (T3SS), a …

[HTML][HTML] Genomic rearrangements and functional diversification of lecA and lecB lectin-coding regions impacting the efficacy of glycomimetics directed against …

AM Boukerb, A Decor, S Ribun, R Tabaroni… - Frontiers in …, 2016 - frontiersin.org
LecA and LecB tetrameric lectins take part in oligosaccharide-mediated adhesion-processes
of Pseudomonas aeruginosa. Glycomimetics have been designed to block these …

Genomic analyses of multidrug resistant Pseudomonas aeruginosa PA1 resequenced by single-molecule real-time sequencing

G Li, M Shen, S Le, Y Tan, M Li, X Zhao… - Bioscience …, 2016 - portlandpress.com
As a third-generation sequencing (TGS) method, single-molecule real-time (SMRT)
technology provides long read length, and it is well suited for resequencing projects and de …

[PDF][PDF] Novel technologies applied to the nucleotide sequencing and comparative sequence analysis of the genomes of infectious agents in veterinary medicine

F Granberg, Á Bálint, S Belák - Rev Sci Tech, 2016 - scholar.archive.org
Summary Next-generation sequencing (NGS), also referred to as deep, high-throughput or
massively parallel sequencing, is a powerful new tool that can be used for the complex …

Commentary: Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium

EL Fonseca, ACP Vicente - Frontiers in microbiology, 2016 - frontiersin.org
The robust study on Pseudomonas aeruginosa genome evolution, epidemiology,
antimicrobial resistance mechanisms, and pathogenesis performed by Freschi et al.(2015) …

SNP synteny analysis of Staphylococcus aureus and Pseudomonas aeruginosa population genomics

P Morán Losada, B Tümmler - FEMS Microbiology Letters, 2016 - academic.oup.com
Genomic sequence diversity of a bacterial species mainly results from the frequency
distribution of single nucleotide polymorphisms (SNPs). Here we report on an SNP matrix …

Analysis of Genomic Islands and Other Features in Draft Versus Complete Bacterial Genomes

JA Shay - 2016 - summit.sfu.ca
Short-read DNA sequencing technologies have revolutionized bacterial genomics, but these
technologies have limitations. It is easy to produce a high quality draft genome, but relatively …

Pathogenic Potential Characterization of Two Distinct "Pseudomonas Aeruginosa Strains"

PJP da Silva - 2016 - search.proquest.com
Pseudomonas aeruginosa is an opportunist and ubiquitous pathogen, displaying high levels
of antibiotic resistance and proliferating in many environments, including healthcare …