Protein–RNA interactions: structural biology and computational modeling techniques
S Jones - Biophysical reviews, 2016 - Springer
RNA-binding proteins are functionally diverse within cells, being involved in RNA-
metabolism, translation, DNA damage repair, and gene regulation at both the transcriptional …
metabolism, translation, DNA damage repair, and gene regulation at both the transcriptional …
[HTML][HTML] In silico aptamer docking studies: from a retrospective validation to a prospective case study'tim3 aptamers binding
Complementing Systematic Evolution of Ligands by EXponential Enrichment (SELEX)
technologies with in silico prediction of aptamer binders has attracted a lot of interest in the …
technologies with in silico prediction of aptamer binders has attracted a lot of interest in the …
[HTML][HTML] Template-based modeling of protein-RNA interactions
Protein-RNA complexes formed by specific recognition between RNA and RNA-binding
proteins play an important role in biological processes. More than a thousand of such …
proteins play an important role in biological processes. More than a thousand of such …
Improved accuracy in rna–protein rigid body docking by incorporating force field for molecular dynamics simulation into the scoring function
RNA–protein interactions play fundamental roles in many biological processes. To
understand these interactions, it is necessary to know the three-dimensional structures of …
understand these interactions, it is necessary to know the three-dimensional structures of …
[HTML][HTML] Using 3dRPC for RNA–protein complex structure prediction
Y Huang, H Li, Y Xiao - Biophysics reports, 2016 - Springer
Abstract 3dRPC is a computational method designed for three-dimensional RNA–protein
complex structure prediction. Starting from a protein structure and a RNA structure, 3dRPC …
complex structure prediction. Starting from a protein structure and a RNA structure, 3dRPC …
Modeling of protein–RNA complex structures using computational docking methods
A significant part of biology involves the formation of RNA–protein complexes. X-ray
crystallography has added a few solved RNA–protein complexes to the repertoire; however …
crystallography has added a few solved RNA–protein complexes to the repertoire; however …
Molecular-Docking-Based Anti-Allergic Drug Design
Allergens are foreign proteins that when come in contact of part (s) of human body stimulate
the production of immunoglobulin types of proteins (antibodies). These allergens react with …
the production of immunoglobulin types of proteins (antibodies). These allergens react with …
[图书][B] RNA-protein structure classifiers incorporated into second-generation statistical potentials
T Kimura - 2016 - search.proquest.com
Computational modeling of RNA-protein interactions remains an important endeavor.
However, exclusively all-atom approaches that model RNA-protein interactions via …
However, exclusively all-atom approaches that model RNA-protein interactions via …