Assessing tumor-infiltrating lymphocytes in solid tumors: a practical review for pathologists and proposal for a standardized method from the International Immuno …
S Hendry, R Salgado, T Gevaert… - Advances in anatomic …, 2017 - journals.lww.com
Assessment of the immune response to tumors is growing in importance as the prognostic
implications of this response are increasingly recognized, and as immunotherapies are …
implications of this response are increasingly recognized, and as immunotherapies are …
DNA damage and repair biomarkers of immunotherapy response
KW Mouw, MS Goldberg, PA Konstantinopoulos… - Cancer discovery, 2017 - AACR
DNA-damaging agents are widely used in clinical oncology and exploit deficiencies in tumor
DNA repair. Given the expanding role of immune checkpoint blockade as a therapeutic …
DNA repair. Given the expanding role of immune checkpoint blockade as a therapeutic …
Landscape of microsatellite instability across 39 cancer types
Purpose Microsatellite instability (MSI) is a pattern of hypermutation that occurs at genomic
microsatellites and is caused by defects in the mismatch repair system. Mismatch repair …
microsatellites and is caused by defects in the mismatch repair system. Mismatch repair …
The whole-genome landscape of medulloblastoma subtypes
Current therapies for medulloblastoma, a highly malignant childhood brain tumour, impose
debilitating effects on the developing child, and highlight the need for molecularly targeted …
debilitating effects on the developing child, and highlight the need for molecularly targeted …
[HTML][HTML] UALCAN: a portal for facilitating tumor subgroup gene expression and survival analyses
DS Chandrashekar, B Bashel, SAH Balasubramanya… - Neoplasia, 2017 - Elsevier
Abstract Genomics data from The Cancer Genome Atlas (TCGA) project has led to the
comprehensive molecular characterization of multiple cancer types. The large sample …
comprehensive molecular characterization of multiple cancer types. The large sample …
[HTML][HTML] Comprehensive analysis of hypermutation in human cancer
We present an extensive assessment of mutation burden through sequencing analysis of>
81,000 tumors from pediatric and adult patients, including tumors with hypermutation caused …
81,000 tumors from pediatric and adult patients, including tumors with hypermutation caused …
[HTML][HTML] Integrated genomic and molecular characterization of cervical cancer
Cancer Genome Atlas Research Network - Nature, 2017 - ncbi.nlm.nih.gov
Cervical cancer remains one of the leading causes of cancer-related deaths worldwide.
Reported here is an extensive molecular characterization of 228 primary cervical cancers …
Reported here is an extensive molecular characterization of 228 primary cervical cancers …
Confirmation of ProMisE: a simple, genomics‐based clinical classifier for endometrial cancer
A Talhouk, MK McConechy, S Leung, W Yang, A Lum… - Cancer, 2017 - Wiley Online Library
BACKGROUND Classification of endometrial carcinomas (ECs) by morphologic features is
irreproducible and imperfectly reflects tumor biology. The authors developed the Proactive …
irreproducible and imperfectly reflects tumor biology. The authors developed the Proactive …
Comprehensive analysis of normal adjacent to tumor transcriptomes
Histologically normal tissue adjacent to the tumor (NAT) is commonly used as a control in
cancer studies. However, little is known about the transcriptomic profile of NAT, how it is …
cancer studies. However, little is known about the transcriptomic profile of NAT, how it is …
[HTML][HTML] Integrated genomic characterization of oesophageal carcinoma
Cancer Genome Atlas Research Network - Nature, 2017 - ncbi.nlm.nih.gov
Oesophageal cancers are prominent worldwide; however, there are few targeted therapies
and survival rates for these cancers remain dismal. Here we performed a comprehensive …
and survival rates for these cancers remain dismal. Here we performed a comprehensive …