Regulation by 3′-untranslated regions
C Mayr - Annual review of genetics, 2017 - annualreviews.org
3′-untranslated regions (3′-UTRs) are the noncoding parts of mRNAs. Compared to
yeast, in humans, median 3′-UTR length has expanded approximately tenfold alongside …
yeast, in humans, median 3′-UTR length has expanded approximately tenfold alongside …
[HTML][HTML] SR proteins: binders, regulators, and connectors of RNA
S Jeong - Molecules and cells, 2017 - Elsevier
Serine and arginine-rich (SR) proteins are RNA-binding proteins (RBPs) known as
constitutive and alternative splicing regulators. As splicing is linked to transcriptional and …
constitutive and alternative splicing regulators. As splicing is linked to transcriptional and …
Variant interpretation: functional assays to the rescue
Classical genetic approaches for interpreting variants, such as case-control or co-
segregation studies, require finding many individuals with each variant. Because the …
segregation studies, require finding many individuals with each variant. Because the …
A compendium of RNA-binding proteins that regulate microRNA biogenesis
T Treiber, N Treiber, U Plessmann, S Harlander… - Molecular cell, 2017 - cell.com
During microRNA (miRNA) biogenesis, two endonucleolytic reactions convert stem-loop-
structured precursors into mature miRNAs. These processing steps can be …
structured precursors into mature miRNAs. These processing steps can be …
Swarm intelligence-enhanced detection of non-small-cell lung cancer using tumor-educated platelets
MG Best, N Sol, S GJG, A Vancura, M Muller… - Cancer cell, 2017 - cell.com
Blood-based liquid biopsies, including tumor-educated blood platelets (TEPs), have
emerged as promising biomarker sources for non-invasive detection of cancer. Here we …
emerged as promising biomarker sources for non-invasive detection of cancer. Here we …
LARP1 functions as a molecular switch for mTORC1-mediated translation of an essential class of mRNAs
S Hong, MA Freeberg, T Han, A Kamath, Y Yao… - Elife, 2017 - elifesciences.org
The RNA binding protein, LARP1, has been proposed to function downstream of mTORC1
to regulate the translation of 5'TOP mRNAs such as those encoding ribosome proteins (RP) …
to regulate the translation of 5'TOP mRNAs such as those encoding ribosome proteins (RP) …
Deep learning of the regulatory grammar of yeast 5′ untranslated regions from 500,000 random sequences
Our ability to predict protein expression from DNA sequence alone remains poor, reflecting
our limited understanding of cis-regulatory grammar and hampering the design of …
our limited understanding of cis-regulatory grammar and hampering the design of …
The roles of RNA processing in translating genotype to phenotype
KS Manning, TA Cooper - Nature reviews Molecular cell biology, 2017 - nature.com
A goal of human genetics studies is to determine the mechanisms by which genetic variation
produces phenotypic differences that affect human health. Efforts in this respect have …
produces phenotypic differences that affect human health. Efforts in this respect have …
Intrinsically disordered RGG/RG domains mediate degenerate specificity in RNA binding
BA Ozdilek, VF Thompson, NS Ahmed… - Nucleic acids …, 2017 - academic.oup.com
RGG/RG domains are the second most common RNA binding domain in the human
genome, yet their RNA-binding properties remain poorly understood. Here, we report a …
genome, yet their RNA-binding properties remain poorly understood. Here, we report a …
Pathogenic variants that alter protein code often disrupt splicing
The lack of tools to identify causative variants from sequencing data greatly limits the
promise of precision medicine. Previous studies suggest that one-third of disease …
promise of precision medicine. Previous studies suggest that one-third of disease …