Radiogenomic analysis of oncological data: a technical survey
M Incoronato, M Aiello, T Infante, C Cavaliere… - International journal of …, 2017 - mdpi.com
In the last few years, biomedical research has been boosted by the technological
development of analytical instrumentation generating a large volume of data. Such …
development of analytical instrumentation generating a large volume of data. Such …
The U6 snRNA m6A methyltransferase METTL16 regulates SAM synthetase intron retention
Maintenance of proper levels of the methyl donor S-adenosylmethionine (SAM) is critical for
a wide variety of biological processes. We demonstrate that the N 6-adenosine …
a wide variety of biological processes. We demonstrate that the N 6-adenosine …
[HTML][HTML] Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis
Background: Given the demonstrated utility of Third Generation Sequencing [Pacific
Biosciences (PacBio) and Oxford Nanopore Technologies (ONT)] long reads in many …
Biosciences (PacBio) and Oxford Nanopore Technologies (ONT)] long reads in many …
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …
Advances in genome sequencing and assembly technologies are generating many high-
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome
Whole transcriptome sequencing (RNA-seq) has become a standard for cataloguing and
monitoring RNA populations. One of the main bottlenecks, however, is to correctly identify …
monitoring RNA populations. One of the main bottlenecks, however, is to correctly identify …
MYC2 orchestrates a hierarchical transcriptional cascade that regulates jasmonate-mediated plant immunity in tomato
The hormone jasmonate (JA), which functions in plant immunity, regulates resistance to
pathogen infection and insect attack through triggering genome-wide transcriptional …
pathogen infection and insect attack through triggering genome-wide transcriptional …
Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome
The decrease in sequencing cost and increased sophistication of assembly algorithms for
short-read platforms has resulted in a sharp increase in the number of species with genome …
short-read platforms has resulted in a sharp increase in the number of species with genome …
Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis
Abstract RNA-sequencing (RNA-seq) is an essential technique for transcriptome studies,
hundreds of analysis tools have been developed since it was debuted. Although recent …
hundreds of analysis tools have been developed since it was debuted. Although recent …
Haplotype-resolved sweet potato genome traces back its hexaploidization history
Here we present the 15 pseudochromosomes of sweet potato, Ipomoea batatas, the seventh
most important crop in the world and the fourth most significant in China. By using a novel …
most important crop in the world and the fourth most significant in China. By using a novel …
PD-1 is a haploinsufficient suppressor of T cell lymphomagenesis
T cell non-Hodgkin lymphomas are a heterogeneous group of highly aggressive
malignancies with poor clinical outcomes. T cell lymphomas originate from peripheral T cells …
malignancies with poor clinical outcomes. T cell lymphomas originate from peripheral T cells …