Variation in recombination frequency and distribution across eukaryotes: patterns and processes

J Stapley, PGD Feulner… - … of the Royal …, 2017 - royalsocietypublishing.org
Recombination, the exchange of DNA between maternal and paternal chromosomes during
meiosis, is an essential feature of sexual reproduction in nearly all multicellular organisms …

The utility of single nucleotide polymorphism (SNP) data in phylogenetics

AD Leaché, JR Oaks - Annual Review of Ecology, Evolution …, 2017 - annualreviews.org
Resolving the genealogy of life—the phylogenetic relationships that describe the
evolutionary history of species—remains one of the great challenges of systematic biology …

Multispecies coalescent delimits structure, not species

J Sukumaran, LL Knowles - Proceedings of the National …, 2017 - National Acad Sciences
The multispecies coalescent model underlies many approaches used for species
delimitation. In previous work assessing the performance of species delimitation under this …

SILVA, RDP, Greengenes, NCBI and OTT—how do these taxonomies compare?

M Balvočiūtė, DH Huson - BMC genomics, 2017 - Springer
Background A key step in microbiome sequencing analysis is read assignment to taxonomic
units. This is often performed using one of four taxonomic classifications, namely SILVA …

Ex situ conservation of plant diversity in the world's botanic gardens

R Mounce, P Smith, S Brockington - Nature Plants, 2017 - nature.com
Botanic gardens conserve plant diversity ex situ and can prevent extinction through
integrated conservation action. Here we quantify how that diversity is conserved in ex situ …

Biodiversity conservation gaps in the Brazilian protected areas

U Oliveira, BS Soares-Filho, AP Paglia, AD Brescovit… - Scientific reports, 2017 - nature.com
Although Brazil is a megadiverse country and thus a conservation priority, no study has yet
quantified conservation gaps in the Brazilian protected areas (PAs) using extensive …

The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants

AJ Bewick, CE Niederhuth, L Ji, NA Rohr, PT Griffin… - Genome biology, 2017 - Springer
Background The evolution of gene body methylation (gbM), its origins, and its functional
consequences are poorly understood. By pairing the largest collection of transcriptomes (> …

The evolution of energetic scaling across the vertebrate tree of life

JC Uyeda, MW Pennell, ET Miller… - The American …, 2017 - journals.uchicago.edu
Metabolism is the link between ecology and physiology—it dictates the flow of energy
through individuals and across trophic levels. Much of the predictive power of metabolic …

[HTML][HTML] Automated assembly of a reference taxonomy for phylogenetic data synthesis

JA Rees, K Cranston - Biodiversity Data Journal, 2017 - ncbi.nlm.nih.gov
Taxonomy and nomenclature data are critical for any project that synthesizes biodiversity
data, as most biodiversity data sets use taxonomic names to identify taxa. Open Tree of Life …

Biospecimen repositories and integrated databases as critical infrastructure for pathogen discovery and pathobiology research

JL Dunnum, R Yanagihara, KM Johnson… - PLoS Neglected …, 2017 - journals.plos.org
A series of emerging pathogen outbreaks during the past 24 months (eg, Ebola virus
disease, Middle East respiratory syndrome, and Zika virus-associated microcephaly, and …