Fungal identification using molecular tools: a primer for the natural products research community

HA Raja, AN Miller, CJ Pearce… - Journal of natural …, 2017 - ACS Publications
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …

[HTML][HTML] Commensal fungi in health and disease

JJ Limon, JH Skalski, DM Underhill - Cell host & microbe, 2017 - cell.com
Fungi are increasingly being recognized as common members of the microbiomes found on
nearly all mucosal surfaces, and interest is growing in understanding how these organisms …

[HTML][HTML] New evidences on the altered gut microbiota in autism spectrum disorders

F Strati, D Cavalieri, D Albanese, C De Felice, C Donati… - Microbiome, 2017 - Springer
Abstract Background Autism spectrum disorders (ASDs) are neurodevelopmental conditions
characterized by social and behavioural impairments. In addition to neurological symptoms …

[HTML][HTML] Metacoder: An R package for visualization and manipulation of community taxonomic diversity data

ZSL Foster, TJ Sharpton… - PLoS computational …, 2017 - journals.plos.org
Community-level data, the type generated by an increasing number of metabarcoding
studies, is often graphed as stacked bar charts or pie graphs that use color to represent taxa …

Drought stress results in a compartment-specific restructuring of the rice root-associated microbiomes

C Santos-Medellín, J Edwards, Z Liechty, B Nguyen… - MBio, 2017 - Am Soc Microbiol
Plant roots support complex microbial communities that can influence plant growth, nutrition,
and health. While extensive characterizations of the composition and spatial …

Temporal dynamics of bacterial and fungal colonization on plastic debris in the North Sea

C De Tender, LI Devriese, A Haegeman… - … science & technology, 2017 - ACS Publications
Despite growing evidence that biofilm formation on plastic debris in the marine environment
may be essential for its biodegradation, the underlying processes have yet to be fully …

Inducing the rhizosphere microbiome by biofertilizer application to suppress banana Fusarium wilt disease

L Fu, CR Penton, Y Ruan, Z Shen, C Xue, R Li… - Soil Biology and …, 2017 - Elsevier
Worldwide, banana production is severely hindered by Fusarium wilt, a devastating disease
caused by the soil-borne fungus Fusarium oxysporum f. sp. cubense (Foc). With no widely …

Environmental filtering by pH and soil nutrients drives community assembly in fungi at fine spatial scales

SI Glassman, IJ Wang, TD Bruns - Molecular ecology, 2017 - Wiley Online Library
Whether niche processes, like environmental filtering, or neutral processes, like dispersal
limitation, are the primary forces driving community assembly is a central question in …

Distinct roles for soil fungal and bacterial communities associated with the suppression of vanilla Fusarium wilt disease

W Xiong, R Li, Y Ren, C Liu, Q Zhao, H Wu… - Soil Biology and …, 2017 - Elsevier
Characterizing microbial communities associated with disease-suppressive soil is an
important first step toward understanding the potential of microbiota to protect crops against …

Bio-fertilizer application induces soil suppressiveness against Fusarium wilt disease by reshaping the soil microbiome

W Xiong, S Guo, A Jousset, Q Zhao, H Wu, R Li… - Soil Biology and …, 2017 - Elsevier
Fusarium wilt disease is a growing problem in agriculture systems. Application of bio-
fertilizers containing beneficial microbes represents a promising disease control strategy …