A combinatorial scoring function for protein–RNA docking

Z Zhang, L Lu, Y Zhang, C Hua Li… - Proteins: Structure …, 2017 - Wiley Online Library
Protein–RNA docking is still an open question. One of the main challenges is to develop an
effective scoring function that can discriminate near‐native structures from the incorrect …

Structural and energy determinants in protein-RNA docking

L Pérez-Cano, M Romero-Durana, J Fernández-Recio - Methods, 2017 - Elsevier
Deciphering the structural and energetic determinants of protein-RNA interactions harbors
the potential to understand key cell processes at molecular level, such as gene expression …

[HTML][HTML] A pair-conformation-dependent scoring function for evaluating 3D RNA-protein complex structures

H Li, Y Huang, Y Xiao - PLoS One, 2017 - journals.plos.org
Computational prediction of RNA-protein complex 3D structures includes two basic steps:
one is sampling possible structures and another is scoring the sampled structures to pick out …

The FOXP2 forkhead domain binds to a variety of DNA sequences with different rates and affinities

H Webb, O Steeb, A Blane, L Rotherham… - The journal of …, 2017 - academic.oup.com
FOXP2 is a member of the P subfamily of FOX transcription factors, the DNA-binding domain
of which is the winged helix forkhead domain (FHD). In this work we show that the FOXP2 …

[PDF][PDF] Regulation von zellulären Proteinnetzwerken nach Stresssignalen

RN Lengert - 2017 - tuprints.ulb.tu-darmstadt.de
Die Aufrechterhaltung des Stoffwechsels und der Funktion von lebenden Zellen erfordert
das Zusammenspiel komplexer Proteinnetzwerke. Diese ermöglichen der Zelle, variierende …

Methods for the analysis and assessment of the three-dimensional structures of proteins and nucleic acids: development and applications

K Olechnovič - 2017 - epublications.vu.lt
Abstract [eng] This dissertation describes three novel effective methods for the analysis and
evaluation of biomolecular structures. The presented methods construct and utilize the …