[HTML][HTML] Advances in integrating genomics and bioinformatics in the plant breeding pipeline

H Hu, A Scheben, D Edwards - Agriculture, 2018 - mdpi.com
With the global human population growing rapidly, agricultural production must increase to
meet crop demand. Improving crops through breeding is a sustainable approach to increase …

[HTML][HTML] Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica

T Paape, RV Briskine, G Halstead-Nussloch… - Nature …, 2018 - nature.com
Genome duplication is widespread in wild and crop plants. However, little is known about
genome-wide selection in polyploids due to the complexity of duplicated genomes. In …

Hybridization and polyploidization within the Chenopodium album aggregate analysed by means of cytological and molecular markers

B Mandák, K Krak, P Vít, MN Lomonosova… - Molecular Phylogenetics …, 2018 - Elsevier
Hybridization and polyploidization represent an important speciation mechanism in the
diploid-polyploid complex of the Chenopodium album aggregate. In the present study we …

Climatic niche comparison among ploidal levels in the classic autopolyploid system, Galax urceolata

ML Gaynor, DB Marchant, DE Soltis… - American Journal of …, 2018 - Wiley Online Library
Premise of The Study Autopolyploidy, or whole‐genome duplication within a species, leads
to closely related cytotypes in one geographic location. One hypothesized mechanism by …

Evidence for allopolyploid speciation in Nymphoides (Menyanthaceae)

NP Tippery, NL Sears, AB Zentner… - Systematic Botany, 2018 - ingentaconnect.com
The floating-leaved aquatic plant genus Nymphoides includes diploid and polyploid species
that are distributed worldwide. Prior studies found widespread incongruence between …

[HTML][HTML] In silico identification and characterization of a diverse subset of conserved microRNAs in bioenergy crop Arundo donax L.

W Jike, G Sablok, G Bertorelle, M Li, C Varotto - Scientific Reports, 2018 - nature.com
MicroRNAs (miRNAs) are small non-coding RNA molecules involved in the post-
transcriptional regulation of gene expression in plants. Arundo donax L. is a perennial C3 …

Genome skimming provides new insight into the relationships in Ludwigia section Macrocarpon, a polyploid complex

SH Liu, CE Edwards, PC Hoch… - American Journal of …, 2018 - Wiley Online Library
Premise of the Study Interpreting relationships within groups containing polyploids, which
are frequent in angiosperms, can be greatly assisted by genomic techniques. In this study …

Homoeologous Exchanges and Gene Losses Generate Diversity and Differentiate the B. napus Genome from that of Its Ancestors

B Samans, R Snowdon, AS Mason - The Brassica napus Genome, 2018 - Springer
Brassica napus (rapeseed) is a young allopolyploid species, formed from the union between
progenitor species B. rapa (2 n= AA) and B. oleracea (2 n= CC) less than 7500 years ago …

Underutilised and neglected crops: next generation sequencing approaches for crop improvement and better food security

LF De Filippis - Global Perspectives on Underutilized Crops, 2018 - Springer
This review illustrates how NGS-derived information can be used to tailor genomic tools for
different needs and applications to non-model crop improvement, and how such …

Molecular biodiversity convergence with biogeography and ethnobotany of rare and endangered medicinal plants from northern Vietnam

NV Huy, HV Hung, RT Buckney… - Plant and Human Health …, 2018 - Springer
The genomic revolution of the last decades has greatly improved our understanding of the
genetic make-up of living organisms. During the last 25 years, remarkable advances in DNA …