Integrative omics for health and disease

KJ Karczewski, MP Snyder - Nature Reviews Genetics, 2018 - nature.com
Advances in omics technologies—such as genomics, transcriptomics, proteomics and
metabolomics—have begun to enable personalized medicine at an extraordinarily detailed …

Mitochondrial medicine in the omics era

J Rahman, S Rahman - The Lancet, 2018 - thelancet.com
Mitochondria are dynamic bioenergetic organelles whose maintenance requires around
1500 proteins from two genomes. Mutations in either the mitochondrial or nuclear genome …

OUTRIDER: a statistical method for detecting aberrantly expressed genes in RNA sequencing data

F Brechtmann, C Mertes, A Matusevičiūtė… - The American Journal of …, 2018 - cell.com
RNA sequencing (RNA-seq) is gaining popularity as a complementary assay to genome
sequencing for precisely identifying the molecular causes of rare disorders. A powerful …

Recessive mutations in VPS13D cause childhood onset movement disorders

J Gauthier, IA Meijer, D Lessel, NE Mencacci… - Annals of …, 2018 - Wiley Online Library
VPS13 protein family members VPS13A through VPS13C have been associated with
various recessive movement disorders. We describe the first disease association of rare …

CHD3 helicase domain mutations cause a neurodevelopmental syndrome with macrocephaly and impaired speech and language

L Snijders Blok, J Rousseau, J Twist… - Nature …, 2018 - nature.com
Chromatin remodeling is of crucial importance during brain development. Pathogenic
alterations of several chromatin remodeling ATPases have been implicated in …

Human diseases associated with defects in assembly of OXPHOS complexes

D Ghezzi, M Zeviani - Essays in biochemistry, 2018 - portlandpress.com
The structural biogenesis and functional proficiency of the multiheteromeric complexes
forming the mitochondrial oxidative phosphorylation system (OXPHOS) require the …

Clinical sequencing: from raw data to diagnosis with lifetime value

SM Caspar, N Dubacher, AM Kopps… - Clinical …, 2018 - Wiley Online Library
High‐throughput sequencing (HTS) has revolutionized genetics by enabling the detection of
sequence variants at hitherto unprecedented large scale. Despite these advances, however …

OCR-Stats: Robust estimation and statistical testing of mitochondrial respiration activities using Seahorse XF Analyzer

VA Yépez, LS Kremer, A Iuso, M Gusic, R Kopajtich… - PloS one, 2018 - journals.plos.org
The accurate quantification of cellular and mitochondrial bioenergetic activity is of great
interest in medicine and biology. Mitochondrial stress tests performed with Seahorse …

The functional genomics laboratory: functional validation of genetic variants

RJ Rodenburg - Journal of inherited metabolic disease, 2018 - Springer
Currently, one of the main challenges in human molecular genetics is the interpretation of
rare genetic variants of unknown clinical significance. A conclusive diagnosis is of …

The role of the clinician in the multi-omics era: are you ready?

CDM van Karnebeek, SB Wortmann… - Journal of Inherited …, 2018 - Springer
Since Garrod's first description of alkaptonuria in 1902, and newborn screening for
phenylketonuria introduced in the 1960s, P4 medicine (preventive, predictive, personalized …