Understanding the promises and hurdles of metagenomic next-generation sequencing as a diagnostic tool for infectious diseases
PJ Simner, S Miller, KC Carroll - Clinical Infectious Diseases, 2018 - academic.oup.com
Agnostic metagenomic next-generation sequencing (mNGS) has emerged as a promising
single, universal pathogen detection method for infectious disease diagnostics. This …
single, universal pathogen detection method for infectious disease diagnostics. This …
Detection of emerging zoonotic pathogens: an integrated one health approach
The emergence of novel zoonotic pathogens is one of the greatest challenges to global
health security. The advent of increasingly sophisticated diagnostics tools has revolutionized …
health security. The advent of increasingly sophisticated diagnostics tools has revolutionized …
The global virome project
Outbreaks of novel and deadly viruses highlight global vulnerability to emerging diseases,
with many having massive health and economic impacts. Our adaptive toolkit—based …
with many having massive health and economic impacts. Our adaptive toolkit—based …
Predicting reservoir hosts and arthropod vectors from evolutionary signatures in RNA virus genomes
Identifying the animal origins of RNA viruses requires years of field and laboratory studies
that stall responses to emerging infectious diseases. Using large genomic and ecological …
that stall responses to emerging infectious diseases. Using large genomic and ecological …
Direct detection and identification of prosthetic joint infection pathogens in synovial fluid by metagenomic shotgun sequencing
MI Ivy, MJ Thoendel, PR Jeraldo… - Journal of clinical …, 2018 - Am Soc Microbiol
Metagenomic shotgun sequencing has the potential to transform how serious infections are
diagnosed by offering universal, culture-free pathogen detection. This may be especially …
diagnosed by offering universal, culture-free pathogen detection. This may be especially …
[HTML][HTML] Assessment of metagenomic Nanopore and Illumina sequencing for recovering whole genome sequences of chikungunya and dengue viruses directly from …
LE Kafetzopoulou, K Efthymiadis… - …, 2018 - eurosurveillance.org
Background The recent global emergence and re-emergence of arboviruses has caused
significant human disease. Common vectors, symptoms and geographical distribution make …
significant human disease. Common vectors, symptoms and geographical distribution make …
Evaluation of bias induced by viral enrichment and random amplification protocols in metagenomic surveys of saliva DNA viruses
M Parras-Moltó, A Rodríguez-Galet… - Microbiome, 2018 - Springer
Background Viruses are key players regulating microbial ecosystems. Exploration of viral
assemblages is now possible thanks to the development of metagenomics, the most …
assemblages is now possible thanks to the development of metagenomics, the most …
A metagenomic viral discovery approach identifies potential zoonotic and novel mammalian viruses in Neoromicia bats within South Africa
Species within the Neoromicia bat genus are abundant and widely distributed in Africa. It is
common for these insectivorous bats to roost in anthropogenic structures in urban regions …
common for these insectivorous bats to roost in anthropogenic structures in urban regions …
Detection of viruses in clinical samples by use of metagenomic sequencing and targeted sequence capture
KM Wylie, TN Wylie, R Buller, B Herter… - Journal of clinical …, 2018 - Am Soc Microbiol
Metagenomic shotgun sequencing (MSS) is a revolutionary approach to viral diagnostic
testing that allows simultaneous detection of a broad range of viruses, detailed taxonomic …
testing that allows simultaneous detection of a broad range of viruses, detailed taxonomic …
Vaccine-elicited receptor-binding site antibodies neutralize two New World hemorrhagic fever arenaviruses
LE Clark, S Mahmutovic, DD Raymond… - Nature …, 2018 - nature.com
While five arenaviruses cause human hemorrhagic fevers in the Western Hemisphere, only
Junin virus (JUNV) has a vaccine. The GP1 subunit of their envelope glycoprotein binds …
Junin virus (JUNV) has a vaccine. The GP1 subunit of their envelope glycoprotein binds …