Nuclear and plastid DNA phylogeny of tribe Cardueae (Compositae) with Hyb-Seq data: A new subtribal classification and a temporal diversification framework

S Herrando-Moraira, JA Calleja… - Molecular Phylogenetics …, 2019 - Elsevier
Classification of tribe Cardueae in natural subtribes has always been a challenge due to the
lack of support of some critical branches in previous phylogenies based on traditional …

Complete chloroplast genome of Camellia japonica genome structures, comparative and phylogenetic analysis

W Li, C Zhang, X Guo, Q Liu, K Wang - PloS one, 2019 - journals.plos.org
Camellia is an economically, ecologically and phylogenetically valuable genus in the family
Theaceae. The frequent interspecific hybridization and polyploidization makes this genus …

Enhancing identification accuracy for powdery mildews using previously underexploited DNA loci

O Ellingham, J David, A Culham - Mycologia, 2019 - Taylor & Francis
The internal transcribed spacer (ITS) DNA marker is routinely used for fungal identification
but gives a clear result for only three out of four powdery mildew samples. A search for new …

The Carrot Genome

P Simon, M Iorizzo, D Grzebelus, R Baranski - 2019 - Springer
Whole-genome sequencing is at the cutting edge of life sciences in the new millennium.
Since the first genome sequencing of the model plant Arabidopsis thaliana in 2000, whole …

Deciphering tea tree chloroplast and mitochondrial genomes of Camellia sinensis var. assamica

F Zhang, W Li, C Gao, D Zhang, L Gao - Scientific Data, 2019 - nature.com
Tea is the most popular non-alcoholic caffeine-containing and the oldest beverage in the
world. In this study, we de novo assembled the chloroplast (cp) and mitochondrial (mt) …

Daucus: Taxonomy, Phylogeny, Distribution

DM Spooner - The carrot genome, 2019 - Springer
Cultivated carrot (Daucus carota subsp. sativus) is the most important member in the
Apiaceae family in terms of economy and nutrition and is considered the second most …

Identification and assessment of variable single-copy orthologous (SCO) nuclear loci for low-level phylogenomics: a case study in the genus Rosa (Rosaceae)

K Debray, J Marie-Magdelaine, T Ruttink… - BMC Evolutionary …, 2019 - Springer
Background With an ever-growing number of published genomes, many low levels of the
Tree of Life now contain several species with enough molecular data to perform shallow …

Targeted amplicon sequencing of 40 nuclear genes supports a single introduction and rapid radiation of Hawaiian Metrosideros (Myrtaceae)

JR Dupuis, Y Pillon, T Sakishima, CEC Gemmill… - Plant Systematics and …, 2019 - Springer
Compared to traditionally used plastid or ribosomal markers, nuclear gene markers provide
many advantages for molecular systematics of plants, and high-throughput sequencing …

Diversification and independent polyploid origins in the disjunct species Alyssum repens from the Southeastern Alps and the Carpathians

A Melichárková, S Španiel, K Marhold… - American Journal of …, 2019 - Wiley Online Library
Premise Disjunct distributions have been commonly observed in mountain plant species
and have stimulated phylogeographic and phylogenetic research. Here we studied Alyssum …

Extensive allopolyploidy in the neotropical genus Lachemilla (Rosaceae) revealed by PCR‐based target enrichment of the nuclear ribosomal DNA cistron and plastid …

DF Morales‐Briones, DC Tank - American Journal of Botany, 2019 - Wiley Online Library
Premise of the Study Polyploidy has been long recognized as an important force in plant
evolution. Previous studies had suggested widespread occurrence of polyploidy and the …