Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases
The widespread occurrence of repetitive stretches of DNA in genomes of organisms across
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …
Insect genomes: progress and challenges
In the wake of constant improvements in sequencing technologies, numerous insect
genomes have been sequenced. Currently, 1219 insect genome‐sequencing projects have …
genomes have been sequenced. Currently, 1219 insect genome‐sequencing projects have …
[HTML][HTML] Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
Allotetraploid cotton is an economically important natural-fiber-producing crop worldwide.
After polyploidization, Gossypium hirsutum L. evolved to produce a higher fiber yield and to …
After polyploidization, Gossypium hirsutum L. evolved to produce a higher fiber yield and to …
[HTML][HTML] A reference genome for pea provides insight into legume genome evolution
We report the first annotated chromosome-level reference genome assembly for pea, Gregor
Mendel's original genetic model. Phylogenetics and paleogenomics show genomic …
Mendel's original genetic model. Phylogenetics and paleogenomics show genomic …
[HTML][HTML] Penaeid shrimp genome provides insights into benthic adaptation and frequent molting
X Zhang, J Yuan, Y Sun, S Li, YI Gao, Y Yu… - Nature …, 2019 - nature.com
Crustacea, the subphylum of Arthropoda which dominates the aquatic environment, is of
major importance in ecology and fisheries. Here we report the genome sequence of the …
major importance in ecology and fisheries. Here we report the genome sequence of the …
Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
INTRODUCTION The ruminants are one of the most successful mammalian lineages,
exhibiting extensive morphological and ecological diversity and containing several key …
exhibiting extensive morphological and ecological diversity and containing several key …
The population genetics of structural variants in grapevine domestication
Structural variants (SVs) are a largely unexplored feature of plant genomes. Little is known
about the type and size of SVs, their distribution among individuals and, especially, their …
about the type and size of SVs, their distribution among individuals and, especially, their …
A genomic view of the reef-building coral Porites lutea and its microbial symbionts
Corals and the reef ecosystems that they support are in global decline due to increasing
anthropogenic pressures such as climate change. However, effective reef conservation …
anthropogenic pressures such as climate change. However, effective reef conservation …
[HTML][HTML] A new spiralian phylogeny places the enigmatic arrow worms among gnathiferans
F Marlétaz, KTCA Peijnenburg, T Goto, N Satoh… - Current Biology, 2019 - cell.com
Chaetognaths (arrow worms) are an enigmatic group of marine animals whose phylogenetic
position remains elusive, in part because they display a mix of developmental and …
position remains elusive, in part because they display a mix of developmental and …
[HTML][HTML] The allotetraploid origin and asymmetrical genome evolution of the common carp Cyprinus carpio
Common carp (Cyprinus carpio) is an allotetraploid species derived from recent whole
genome duplication and provides a model to study polyploid genome evolution in …
genome duplication and provides a model to study polyploid genome evolution in …