New SDC function prediction based on protein-protein interaction using bioinformatics tools

FS Zandonadi, EC Santa Cruz, J Korvala - Computational biology and …, 2019 - Elsevier
The precise roles for SDC have been complex to specify. Assigning and reanalyzing protein
and peptide identification to novel protein functions is one of the most important challenges …

LCN2-interacting proteins and their expression patterns in brain tumors

Z Du, B Wu, Q Xia, Y Zhao, L Lin, Z Cai, S Wang, E Li… - Brain Research, 2019 - Elsevier
Abstract Lipocalin 2 (LCN2) is a member of the lipocalin family. Elevated expression of
LCN2 has been observed in many human tumors, suggesting it might be a potential …

A study of colormaps in network visualization

RM Karim, OH Kwon, C Park, K Lee - Applied Sciences, 2019 - mdpi.com
Color is a widely used visual channel for encoding data in visualization design. It is
important to select the appropriate type of color mapping to better understand the data …

[HTML][HTML] The analyses of SRCR genes based on protein-protein interaction network in esophageal squamous cell carcinoma

Z Du, Q Xia, B Wu, J Ding, Y Zhao, L Lin… - American Journal of …, 2019 - ncbi.nlm.nih.gov
The scavenger receptor cysteine-rich (SRCR) proteins, with one to several SRCR domains,
play important roles in human diseases. A full view of their functions in esophageal …

A new grid-and modularity-based layout algorithm for complex biological networks

S He, YJ Liu, FY Ye, RP Li, RJ Dai - Plos one, 2019 - journals.plos.org
The visualization of biological networks is critically important to aid researchers in
understanding complex biological systems and arouses interest in designing efficient layout …

[PDF][PDF] PaIntDB: Visualizing Protein-Protein and Protein-Metabolite Interaction Networks in Pseudomonas aeruginosa

JJ Castillo-Arnemann - cs.ubc.ca
PaIntDB is an interactive network visualization tool designed to help biologists interpret the
results from high-throughput experiments. It takes a list of genes as input and outputs a …