Mass spectrometry-based protein footprinting for higher-order structure analysis: fundamentals and applications

XR Liu, MM Zhang, ML Gross - Chemical reviews, 2020 - ACS Publications
Proteins adopt different higher-order structures (HOS) to enable their unique biological
functions. Understanding the complexities of protein higher-order structures and dynamics …

Cleavable Cross-Linkers and Mass Spectrometry for the Ultimate Task of Profiling Protein–Protein Interaction Networks in Vivo

M Matzinger, K Mechtler - Journal of proteome research, 2020 - ACS Publications
Cross-linking mass spectrometry (XL-MS) has matured into a potent tool to identify protein–
protein interactions or to uncover protein structures in living cells, tissues, or organelles. The …

Mitochondrial protein interaction landscape of SS-31

JD Chavez, X Tang, MD Campbell… - Proceedings of the …, 2020 - National Acad Sciences
Mitochondrial dysfunction underlies the etiology of a broad spectrum of diseases including
heart disease, cancer, neurodegenerative diseases, and the general aging process …

[HTML][HTML] Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins

T Tayri-Wilk, M Slavin, J Zamel, A Blass… - Nature …, 2020 - nature.com
Whole-cell cross-linking coupled to mass spectrometry is one of the few tools that can probe
protein–protein interactions in intact cells. A very attractive reagent for this purpose is …

Proteomics in non-model organisms: a new analytical frontier

M Heck, BA Neely - Journal of proteome research, 2020 - ACS Publications
For the last century we have relied on model organisms to help understand fundamental
biological processes. Now, with advancements in genome sequencing, assembly, and …

Cross-linking/mass spectrometry to get a closer view on protein interaction networks

C Iacobucci, M Götze, A Sinz - Current opinion in biotechnology, 2020 - Elsevier
Just recently, chemical cross-linking combined with mass spectrometry (XL-MS) has
emerged as valuable tool to study protein interaction networks on the system-wide level. The …

[HTML][HTML] A cross-linking mass spectrometry approach defines protein interactions in yeast mitochondria

A Linden, M Deckers, I Parfentev, R Pflanz… - Molecular & Cellular …, 2020 - ASBMB
Protein cross-linking and the analysis of cross-linked peptides by mass spectrometry is
currently receiving much attention. Not only is this approach applied to isolated complexes …

[HTML][HTML] Improving identification of in-organello protein-protein interactions using an affinity-enrichable, isotopically coded, and mass spectrometry-cleavable chemical …

KAT Makepeace, Y Mohammed… - Molecular & Cellular …, 2020 - ASBMB
An experimental and computational approach for identification of protein-protein interactions
by ex vivo chemical crosslinking and mass spectrometry (CLMS) has been developed that …

Isobaric quantitative protein interaction reporter technology for comparative interactome studies

JD Chavez, A Keller, JP Mohr, JE Bruce - Analytical chemistry, 2020 - ACS Publications
Chemical cross-linking with mass spectrometry (XL-MS) has emerged as a useful tool for the
large-scale study of protein structures and interactions from complex biological samples …

Mass spectrometry in virological sciences

A Milewska, J Ner‐Kluza, A Dabrowska… - Mass spectrometry …, 2020 - Wiley Online Library
Virology, as a branch of the life sciences, discovered mass spectrometry (MS) to be the
pivotal tool around two decades ago. The technique unveiled the complex network of …