Challenges and approaches to genotyping repetitive DNA

EA Morton, AN Hall, E Kwan, C Mok… - G3: Genes …, 2020 - academic.oup.com
Individuals within a species can exhibit vast variation in copy number of repetitive DNA
elements. This variation may contribute to complex traits such as lifespan and disease, yet it …

TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats

A Mikheenko, AV Bzikadze, A Gurevich, KH Miga… - …, 2020 - academic.oup.com
Motivation Extra-long tandem repeats (ETRs) are widespread in eukaryotic genomes and
play an important role in fundamental cellular processes, such as chromosome segregation …

[HTML][HTML] Haplotypes of the mutated SIRT2 promoter contributing to transcription factor binding and type 2 diabetes susceptibility

X Zheng, J Li, J Sheng, Y Dai, Y Wang, J Liu, Y Xu - Genes, 2020 - mdpi.com
Genetic variability is an important causative factor for susceptibility and pathogenesis of type
2 diabetes (T2D). Histone deacetylase, sirtuin 2 (SIRT2), plays regulatory roles in glucose …

Expanding genes, repeating themes and therapeutic schemes: The neurobiology of tandem repeat disorders

AJ Hannan - Neurobiology of disease, 2020 - pubmed.ncbi.nlm.nih.gov
Expanding genes, repeating themes and therapeutic schemes: The neurobiology of tandem
repeat disorders Expanding genes, repeating themes and therapeutic schemes: The …

Accuracy of Imputation of Microsatellite Markers from an SNP50K Chip in Spanish Assaf Sheep

H Marina, A Suarez-Vega, R Pelayo, B Gutierrez-Gil… - 2020 - researchsquare.com
Background: Traditional and new genotyping technologies must be combined by applying
bridge methodologies that avoid double genotyping costs. This study aims to identify and …