Correlation and association analyses in microbiome study integrating multiomics in health and disease
Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …
research fields, including microbiome and integrative multiomics studies. Correlation and …
A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome
The mucosal surfaces of fish represent an important barrier that supports and regulates a
diverse array of microbial assemblages and contributes to the overall health and fitness of …
diverse array of microbial assemblages and contributes to the overall health and fitness of …
PICRUSt2 for prediction of metagenome functions
To the Editor—One limitation of microbial community marker-gene sequencing is that it does
not provide information about the functional composition of sampled communities …
not provide information about the functional composition of sampled communities …
[HTML][HTML] Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences
Abstract Background Sequencing of 16S rRNA genes has become a powerful technique to
study microbial communities and their responses towards changing environmental …
study microbial communities and their responses towards changing environmental …
[HTML][HTML] Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease
FJ Ryan, AM Ahern, RS Fitzgerald… - Nature …, 2020 - nature.com
Studies of inflammatory bowel disease (IBD) have been inconclusive in relating microbiota
with distribution of inflammation. We report microbiota, host transcriptomics, epigenomics …
with distribution of inflammation. We report microbiota, host transcriptomics, epigenomics …
[HTML][HTML] PROVIT: Supplementary probiotic treatment and vitamin B7 in depression—A randomized controlled trial
EZ Reininghaus, M Platzer, A Kohlhammer-Dohr… - Nutrients, 2020 - mdpi.com
Gut microbiota are suspected to affect brain functions and behavior as well as lowering
inflammation status. Therefore, an effect on depression has already been suggested by …
inflammation status. Therefore, an effect on depression has already been suggested by …
[HTML][HTML] Gut microbiome profiles are associated with type 2 diabetes in urban Africans
AP Doumatey, A Adeyemo, J Zhou, L Lei… - Frontiers in cellular …, 2020 - frontiersin.org
Gut dysbiosis has been associated with several disease outcomes including diabetes in
human populations. Currently, there are no studies of the gut microbiome composition in …
human populations. Currently, there are no studies of the gut microbiome composition in …
[HTML][HTML] Self-reinoculation with fecal flora changes microbiota density and composition leading to an altered bile-acid profile in the mouse small intestine
Background The upper gastrointestinal tract plays a prominent role in human physiology as
the primary site for enzymatic digestion and nutrient absorption, immune sampling, and drug …
the primary site for enzymatic digestion and nutrient absorption, immune sampling, and drug …
[HTML][HTML] Lactobacillus acidophilus and L. plantarum improve health status, modulate gut microbiota and innate immune response of marron (Cherax cainii)
This study aimed to investigate the combined effects of two most potent probiotic bacteria
Lactobacillus acidophilus and Lactobacillus plantarum on overall health and immune status …
Lactobacillus acidophilus and Lactobacillus plantarum on overall health and immune status …
Structured exercise alters the gut microbiota in humans with overweight and obesity—A randomized controlled trial
Objectives Studies suggest that exercise affects the composition and function of the human
gut microbiota, yet this has not been investigated in a randomized controlled trial. The …
gut microbiota, yet this has not been investigated in a randomized controlled trial. The …