On the Evolution and Functional Diversity of Terpene Synthases in the Pinus Species: A Review

E Alicandri, AR Paolacci, S Osadolor… - Journal of Molecular …, 2020 - Springer
In the biosynthesis of terpenoids, the ample catalytic versatility of terpene synthases (TPS)
allows the formation of thousands of different molecules. A steadily increasing number of …

275 years of forestry meets genomics in Pinus sylvestris

T Pyhäjärvi, ST Kujala… - Evolutionary Applications, 2020 - Wiley Online Library
Pinus sylvestris has a long history of basic and applied research that is relevant for both
forestry and evolutionary studies. Its patterns of adaptive variation and role in forest …

[HTML][HTML] Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known …

YA Putintseva, EI Bondar, EP Simonov, VV Sharov… - BMC genomics, 2020 - Springer
Background Plant mitochondrial genomes (mitogenomes) can be structurally complex while
their size can vary from~ 222 Kbp in Brassica napus to 11.3 Mbp in Silene conica. To date …

A reference genome sequence for giant sequoia

AD Scott, AV Zimin, D Puiu, R Workman… - G3: Genes …, 2020 - academic.oup.com
The giant sequoia (Sequoiadendron giganteum) of California are massive, long-lived trees
that grow along the US Sierra Nevada mountains. Genomic data are limited in giant sequoia …

[PDF][PDF] Distinct expression and methylation patterns for genes with different fates following a single whole-genome duplication in flowering plants

T Shi, RS Rahmani, PF Gugger, M Wang… - Molecular Biology …, 2020 - academic.oup.com
For most sequenced flowering plants, multiple whole-genome duplications (WGDs) are
found. Duplicated genes following WGD often have different fates that can quickly disappear …

Evaluating genomic data for management of local adaptation in a changing climate: A lodgepole pine case study

CR Mahony, IR MacLachlan, BM Lind… - Evolutionary …, 2020 - Wiley Online Library
We evaluate genomic data, relative to phenotypic and climatic data, as a basis for assisted
gene flow and genetic conservation. Using a seedling common garden trial of 281 …

[HTML][HTML] Evaluation of the efficiency of genomic versus pedigree predictions for growth and wood quality traits in Scots pine

A Calleja-Rodriguez, J Pan, T Funda, Z Chen, J Baison… - BMC genomics, 2020 - Springer
Background Genomic selection (GS) or genomic prediction is a promising approach for tree
breeding to obtain higher genetic gains by shortening time of progeny testing in breeding …

Effects of landscapes and range expansion on population structure and local adaptation

W Zhao, YQ Sun, J Pan, AR Sullivan… - New …, 2020 - Wiley Online Library
Understanding the origin and distribution of genetic diversity across landscapes is critical for
predicting the future of organisms in changing climates. This study investigated how …

Assessing the sensitivities of genomic selection for growth and wood quality traits in lodgepole pine using Bayesian models

NK Ukrainetz, SD Mansfield - Tree Genetics & Genomes, 2020 - Springer
Genomic selection is an attractive option to complement the existing investments of the
lodgepole pine (Pinus contorta Douglas) breeding program in British Columbia, Canada …

[HTML][HTML] Multiple metabolic innovations and losses are associated with major transitions in land plant evolution

N Cannell, DM Emms, AJ Hetherington, J MacKay… - Current Biology, 2020 - cell.com
Investigating the evolution of plant biochemistry is challenging because few metabolites are
preserved in fossils and because metabolic networks are difficult to experimentally …