Recent advances and future perspectives in cotton research

G Huang, JQ Huang, XY Chen… - Annual review of plant …, 2021 - annualreviews.org
Cotton is not only the world's most important natural fiber crop, but it is also an ideal system
in which to study genome evolution, polyploidization, and cell elongation. With the assembly …

Genetic Diversity, QTL Mapping, and Marker-Assisted Selection Technology in Cotton (Gossypium spp.)

FN Kushanov, OS Turaev, DK Ernazarova… - Frontiers in plant …, 2021 - frontiersin.org
Cotton genetic resources contain diverse economically important traits that can be used
widely in breeding approaches to create of high-yielding elite cultivars with superior fiber …

Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa

X Cai, L Chang, T Zhang, H Chen, L Zhang, R Lin… - Genome biology, 2021 - Springer
Background Despite the prevalence and recurrence of polyploidization in the speciation of
flowering plants, its impacts on crop intraspecific genome diversification are largely …

Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis

A Rai, H Hirakawa, R Nakabayashi, S Kikuchi… - Nature …, 2021 - nature.com
Plant genomes remain highly fragmented and are often characterized by hundreds to
thousands of assembly gaps. Here, we report chromosome-level reference and phased …

CottonGen: the community database for cotton genomics, genetics, and breeding research

J Yu, S Jung, CH Cheng, T Lee, P Zheng, K Buble… - Plants, 2021 - mdpi.com
Over the last eight years, the volume of whole genome, gene expression, SNP genotyping,
and phenotype data generated by the cotton research community has exponentially …

The origin of the legumes is a complex paleopolyploid phylogenomic tangle closely associated with the Cretaceous–Paleogene (K–Pg) mass extinction event

EJM Koenen, DI Ojeda, FT Bakker… - Systematic …, 2021 - academic.oup.com
The consequences of the Cretaceous–Paleogene (K–Pg) boundary (KPB) mass extinction
for the evolution of plant diversity remain poorly understood, even though evolutionary …

Comparative genome analyses highlight transposon-mediated genome expansion and the evolutionary architecture of 3D genomic folding in cotton

M Wang, J Li, P Wang, F Liu, Z Liu… - Molecular biology …, 2021 - academic.oup.com
Transposable element (TE) amplification has been recognized as a driving force mediating
genome size expansion and evolution, but the consequences for shaping 3D genomic …

The chromosome-level reference genome of Coptis chinensis provides insights into genomic evolution and berberine biosynthesis

D Chen, Y Pan, Y Wang, YZ Cui, YJ Zhang… - Horticulture …, 2021 - academic.oup.com
Coptis chinensis Franch, a perennial herb, is mainly distributed in southeastern China. The
rhizome of C. chinensis has been used as a traditional medicine for more than 2000 years in …

MIXTAs and phytohormones orchestrate cotton fiber development

Y Tian, T Zhang - Current opinion in plant biology, 2021 - Elsevier
Highlights•Seed trichome or fiber in cotton serves as an ideal model to study plant cell
differentiation.•Fiber initiation determines cotton fiber yield.•GhMMLs evolve important and …

Evolution and diversity of the cotton genome

G Hu, CE Grover, J Jareczek, D Yuan, Y Dong… - Cotton precision …, 2021 - Springer
We present an overview of Gossypium genome evolution and the implications of this
understanding for targeted breeding objectives. The cotton genus (Gossypium) contains …