Plant NLR diversity: the known unknowns of pan-NLRomes
AC Barragan, D Weigel - The Plant Cell, 2021 - academic.oup.com
Plants and pathogens constantly adapt to each other. As a consequence, many members of
the plant immune system, and especially the intracellular nucleotide-binding site leucine …
the plant immune system, and especially the intracellular nucleotide-binding site leucine …
Current status of structural variation studies in plants
Structural variations (SVs) including gene presence/absence variations and copy number
variations are a common feature of genomes in plants and, together with single nucleotide …
variations are a common feature of genomes in plants and, together with single nucleotide …
The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity
Plants deploy cell-surface and intracellular leucine rich-repeat domain (LRR) immune
receptors to detect pathogens. LRR receptor kinases and LRR receptor proteins at the …
receptors to detect pathogens. LRR receptor kinases and LRR receptor proteins at the …
Review on the development and applications of medicinal plant genomes
QQ Cheng, Y Ouyang, ZY Tang, CC Lao… - Frontiers in plant …, 2021 - frontiersin.org
With the development of sequencing technology, the research on medicinal plants is no
longer limited to the aspects of chemistry, pharmacology, and pharmacodynamics, but …
longer limited to the aspects of chemistry, pharmacology, and pharmacodynamics, but …
Genome-wide comparative analyses of GATA transcription factors among 19 Arabidopsis ecotype genomes: Intraspecific characteristics of GATA transcription factors
M Kim, H Xi, J Park - PloS one, 2021 - journals.plos.org
GATA transcription factors (TFs) are widespread eukaryotic regulators whose DNA-binding
domain is a class IV zinc finger motif (CX2CX17-20CX2C) followed by a basic region. Due to …
domain is a class IV zinc finger motif (CX2CX17-20CX2C) followed by a basic region. Due to …
1,135 ionomes reveal the global pattern of leaf and seed mineral nutrient and trace element diversity in Arabidopsis thaliana
ACAL Campos, WFA van Dijk, P Ramakrishna… - The Plant …, 2021 - Wiley Online Library
Soil is a heterogeneous reservoir of essential elements needed for plant growth and
development. Plants have evolved mechanisms to balance their nutritional needs based on …
development. Plants have evolved mechanisms to balance their nutritional needs based on …
Genetics of autoimmunity in plants: an evolutionary genetics perspective
Autoimmunity in plants has been found in numerous hybrids as a form of hybrid necrosis
and mutant panels. Uncontrolled cell death is a main cellular outcome of autoimmunity …
and mutant panels. Uncontrolled cell death is a main cellular outcome of autoimmunity …
A New Catalog of Structural Variants in 1,301 A. thaliana Lines from Africa, Eurasia, and North America Reveals a Signature of Balancing Selection at Defense …
M Göktay, A Fulgione… - Molecular biology and …, 2021 - academic.oup.com
Genomic variation in the model plant Arabidopsis thaliana has been extensively used to
understand evolutionary processes in natural populations, mainly focusing on single …
understand evolutionary processes in natural populations, mainly focusing on single …
GWAS for genetics of complex quantitative traits: Genome to pangenome and SNPs to SVs and k‐mers
PK Gupta - BioEssays, 2021 - Wiley Online Library
The development of improved methods for genome‐wide association studies (GWAS) for
genetics of quantitative traits has been an active area of research during the last 25 years …
genetics of quantitative traits has been an active area of research during the last 25 years …
Limits and convergence properties of the sequentially Markovian coalescent
TPP Sellinger, D Abu‐Awad… - Molecular Ecology …, 2021 - Wiley Online Library
Several methods based on the sequentially Markovian coalescent (SMC) make use of full
genome sequence data from samples to infer population demographic history including past …
genome sequence data from samples to infer population demographic history including past …