Integrating fossil observations into phylogenetics using the fossilized birth–death model

AM Wright, DW Bapst, J Barido-Sottani… - Annual Review of …, 2022 - annualreviews.org
Over the past decade, a new set of methods for estimating dated trees has emerged.
Originally referred to as the fossilized birth–death (FBD) process, this single model has …

Integrated phylogenomics and fossil data illuminate the evolution of beetles

C Cai, E Tihelka, M Giacomelli… - Royal Society …, 2022 - royalsocietypublishing.org
Beetles constitute the most biodiverse animal order with over 380 000 described species
and possibly several million more yet unnamed. Recent phylogenomic studies have arrived …

A species-level timeline of mammal evolution integrating phylogenomic data

S Álvarez-Carretero, AU Tamuri, M Battini… - Nature, 2022 - nature.com
High-throughput sequencing projects generate genome-scale sequence data for species-
level phylogenies,–. However, state-of-the-art Bayesian methods for inferring timetrees are …

Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants

BJ Harris, JW Clark, D Schrempf, GJ Szöllősi… - Nature Ecology & …, 2022 - nature.com
The origin of plants and their colonization of land fundamentally transformed the terrestrial
environment. Here we elucidate the basis of this formative episode in Earth history through …

The molecular phylogeny of land plants: progress and future prospects

GQ Liu, L Lian, W Wang - Diversity, 2022 - mdpi.com
Phylogenetics has become a powerful tool in many areas of biology. Land plants are the
most important primary producers of terrestrial ecosystems and have colonized various …

Phylotranscriptomic insights into a Mesoproterozoic–Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Z Hou, X Ma, X Shi, X Li, L Yang, S Xiao… - Nature …, 2022 - nature.com
The Ulvophyceae, a major group of green algae, is of particular evolutionary interest
because of its remarkable morphological and ecological diversity. Its phylogenetic …

Pulled diversification rates, lineages-through-time plots, and modern macroevolutionary modeling

AJ Helmstetter, S Glemin, J Käfer… - Systematic …, 2022 - academic.oup.com
Estimating time-dependent rates of speciation and extinction from dated phylogenetic trees
of extant species (timetrees), and determining how and why they vary, is key to …

Inner ear biomechanics reveals a Late Triassic origin for mammalian endothermy

R Araújo, R David, J Benoit, JK Lungmus, A Stoessel… - Nature, 2022 - nature.com
Endothermy underpins the ecological dominance of mammals and birds in diverse
environmental settings 1, 2. However, it is unclear when this crucial feature emerged during …

Combining palaeontological and neontological data shows a delayed diversification burst of carcharhiniform sharks likely mediated by environmental change

B Brée, FL Condamine, G Guinot - Scientific Reports, 2022 - nature.com
Estimating deep-time species-level diversification processes remains challenging. Both the
fossil record and molecular phylogenies allow the estimation of speciation and extinction …

The Ediacaran origin of Ecdysozoa: integrating fossil and phylogenomic data

RJ Howard, M Giacomelli… - Journal of the …, 2022 - lyellcollection.org
Ecdysozoans (Phyla Arthropoda, Kinorhyncha, Loricifera, Nematoda, Nematomorpha,
Onychophora, Priapulida, Tardigrada) are invertebrates bearing a tough, periodically …