How to proceed after “negative” exome: A review on genetic diagnostics, limitations, challenges, and emerging new multiomics techniques

SB Wortmann, MM Oud, M Alders… - Journal of Inherited …, 2022 - Wiley Online Library
Exome sequencing (ES) in the clinical setting of inborn metabolic diseases (IMDs) has
created tremendous improvement in achieving an accurate and timely molecular diagnosis …

Substitution mutational signatures in whole-genome–sequenced cancers in the UK population

A Degasperi, X Zou, T Dias Amarante… - Science, 2022 - science.org
Whole-genome sequencing (WGS) permits comprehensive cancer genome analyses,
revealing mutational signatures, imprints of DNA damage, and repair processes that have …

Machine learning approaches to explore digenic inheritance

A Okazaki, J Ott - Trends in Genetics, 2022 - cell.com
Some rare genetic disorders, such as retinitis pigmentosa or Alport syndrome, are caused by
the co-inheritance of DNA variants at two different genetic loci (digenic inheritance). To …

An automated 13.5 hour system for scalable diagnosis and acute management guidance for genetic diseases

MJ Owen, S Lefebvre, C Hansen, CM Kunard… - Nature …, 2022 - nature.com
While many genetic diseases have effective treatments, they frequently progress rapidly to
severe morbidity or mortality if those treatments are not implemented immediately. Since …

Genetic and chemotherapeutic influences on germline hypermutation

J Kaplanis, B Ide, R Sanghvi, M Neville, P Danecek… - Nature, 2022 - nature.com
Mutations in the germline generates all evolutionary genetic variation and is a cause of
genetic disease. Parental age is the primary determinant of the number of new germline …

Recommendations for whole genome sequencing in diagnostics for rare diseases

E Souche, S Beltran, E Brosens, JW Belmont… - European Journal of …, 2022 - nature.com
In 2016, guidelines for diagnostic Next Generation Sequencing (NGS) have been published
by EuroGentest in order to assist laboratories in the implementation and accreditation of …

The impact of modifier genes on cone-rod dystrophy heterogeneity: An explorative familial pilot study and a hypothesis on neurotransmission impairment

L Donato, S Alibrandi, C Scimone, C Rinaldi… - PLoS …, 2022 - journals.plos.org
Cone-rod dystrophies (CORDs) are a heterogeneous group of inherited retinopathies (IRDs)
with more than 30 already known disease-causing genes. Uncertain phenotypes and …

[PDF][PDF] The human mitochondrial genome contains a second light strand promoter

BG Tan, CD Mutti, Y Shi, X Xie, X Zhu, P Silva-Pinheiro… - Molecular Cell, 2022 - cell.com
The human mitochondrial genome must be replicated and expressed in a timely manner to
maintain energy metabolism and supply cells with adequate levels of adenosine …

Non-coding variants disrupting a tissue-specific regulatory element in HK1 cause congenital hyperinsulinism

MN Wakeling, NDL Owens, JR Hopkinson… - Nature …, 2022 - nature.com
Gene expression is tightly regulated, with many genes exhibiting cell-specific silencing
when their protein product would disrupt normal cellular function. This silencing is largely …

[PDF][PDF] Progressive liver, kidney, and heart degeneration in children and adults affected by TULP3 mutations

J Devane, E Ott, EG Olinger, D Epting, E Decker… - The American Journal of …, 2022 - cell.com
Organ fibrosis is a shared endpoint of many diseases, yet underlying mechanisms are not
well understood. Several pathways governed by the primary cilium, a sensory antenna …