A guide for the diagnosis of rare and undiagnosed disease: beyond the exome
Rare diseases affect 30 million people in the USA and more than 300–400 million
worldwide, often causing chronic illness, disability, and premature death. Traditional …
worldwide, often causing chronic illness, disability, and premature death. Traditional …
Sources of cancer neoantigens beyond single-nucleotide variants
The success of checkpoint blockade therapy against cancer has unequivocally shown that
cancer cells can be effectively recognized by the immune system and eliminated. However …
cancer cells can be effectively recognized by the immune system and eliminated. However …
Transcriptome variation in human tissues revealed by long-read sequencing
DA Glinos, G Garborcauskas, P Hoffman, N Ehsan… - Nature, 2022 - nature.com
Regulation of transcript structure generates transcript diversity and plays an important role in
human disease,,,,,–. The advent of long-read sequencing technologies offers the opportunity …
human disease,,,,,–. The advent of long-read sequencing technologies offers the opportunity …
Clinical implementation of RNA sequencing for Mendelian disease diagnostics
Background Lack of functional evidence hampers variant interpretation, leaving a large
proportion of individuals with a suspected Mendelian disorder without genetic diagnosis …
proportion of individuals with a suspected Mendelian disorder without genetic diagnosis …
Whole exome and genome sequencing in mendelian disorders: a diagnostic and health economic analysis
LJ Ewans, AE Minoche, D Schofield… - European Journal of …, 2022 - nature.com
Whole genome sequencing (WGS) improves Mendelian disorder diagnosis over whole
exome sequencing (WES); however, additional diagnostic yields and costs remain …
exome sequencing (WES); however, additional diagnostic yields and costs remain …
Whole genome sequence analysis of blood lipid levels in> 66,000 individuals
Blood lipids are heritable modifiable causal factors for coronary artery disease. Despite well-
described monogenic and polygenic bases of dyslipidemia, limitations remain in discovery …
described monogenic and polygenic bases of dyslipidemia, limitations remain in discovery …
Genome-wide detection of human variants that disrupt intronic branchpoints
P Zhang, Q Philippot, W Ren, WT Lei… - Proceedings of the …, 2022 - National Acad Sciences
Pre-messenger RNA splicing is initiated with the recognition of a single-nucleotide intronic
branchpoint (BP) within a BP motif by spliceosome elements. Forty-eight rare variants in 43 …
branchpoint (BP) within a BP motif by spliceosome elements. Forty-eight rare variants in 43 …
How to proceed after “negative” exome: A review on genetic diagnostics, limitations, challenges, and emerging new multiomics techniques
SB Wortmann, MM Oud, M Alders… - Journal of Inherited …, 2022 - Wiley Online Library
Exome sequencing (ES) in the clinical setting of inborn metabolic diseases (IMDs) has
created tremendous improvement in achieving an accurate and timely molecular diagnosis …
created tremendous improvement in achieving an accurate and timely molecular diagnosis …
Transcriptome deregulation of peripheral monocytes and whole blood in GBA-related Parkinson's disease
Background Genetic mutations in beta-glucocerebrosidase (GBA) represent the major
genetic risk factor for Parkinson's disease (PD). GBA participates in both the endo-lysosomal …
genetic risk factor for Parkinson's disease (PD). GBA participates in both the endo-lysosomal …
RNA sequencing and its applications in cancer and rare diseases
S Ergin, N Kherad, M Alagoz - Molecular Biology Reports, 2022 - Springer
With the invention of RNA sequencing over a decade ago, diagnosis and identification of the
gene-related diseases entered a new phase that enabled more accurate analysis of the …
gene-related diseases entered a new phase that enabled more accurate analysis of the …