Defining coalescent genes: theory meets practice in organelle phylogenomics
JJ Doyle - Systematic biology, 2022 - academic.oup.com
The species tree paradigm that dominates current molecular systematic practice infers
species trees from collections of sequences under assumptions of the multispecies …
species trees from collections of sequences under assumptions of the multispecies …
Taxon‐specific or universal? Using target capture to study the evolutionary history of rapid radiations
Target capture has emerged as an important tool for phylogenetics and population genetics
in nonmodel taxa. Whereas developing taxon‐specific capture probes requires sustained …
in nonmodel taxa. Whereas developing taxon‐specific capture probes requires sustained …
[HTML][HTML] Deep insights into the plastome evolution and phylogenetic relationships of the tribe Urticeae (Family Urticaceae)
Urticeae sl, a tribe of Urticaceae well-known for their stinging trichomes, consists of more
than 10 genera and approximately 220 species. Relationships within this tribe remain poorly …
than 10 genera and approximately 220 species. Relationships within this tribe remain poorly …
[HTML][HTML] Mahonia vs. Berberis unloaded: generic delimitation and infrafamilial classification of Berberidaceae based on plastid phylogenomics
The early-diverging eudicot family Berberidaceae is composed of a morphologically diverse
assemblage of disjunctly distributed genera long praised for their great horticultural and …
assemblage of disjunctly distributed genera long praised for their great horticultural and …
Out of chaos: Phylogenomics of Asian Sonerileae
Sonerileae is a diverse Melastomataceae lineage comprising ca. 1000 species in 44
genera, with> 70% of genera and species distributed in Asia. Asian Sonerileae are …
genera, with> 70% of genera and species distributed in Asia. Asian Sonerileae are …
Toward finally unraveling the phylogenetic relationships of Juncaceae with respect to another cyperid family, Cyperaceae
V Brožová, J Proćków, LZ Drábková - Molecular Phylogenetics and …, 2022 - Elsevier
Juncaceae is a cosmopolitan family belonging to the cyperid clade of Poales together with
Cyperaceae and Thurniaceae. These families have global economic and ethnobotanical …
Cyperaceae and Thurniaceae. These families have global economic and ethnobotanical …
Deep Genotypic Species Delimitation of Aspergillus Section Flavi Isolated from Brazilian Foodstuffs and the Description of Aspergillus annui sp. nov. and Aspergillus …
Aspergillus section Flavi is a fungal group that is important in food because it contains
spoilage and potentially aflatoxigenic species. Aflatoxins are metabolites that are harmful to …
spoilage and potentially aflatoxigenic species. Aflatoxins are metabolites that are harmful to …
Incomplete lineage sorting and reticulate evolution mask species relationships in Brunelliaceae, an Andean family with rapid, recent diversification
J Murillo‐A, J Valencia‐D, CI Orozco… - American Journal of …, 2022 - Wiley Online Library
Premise To date, phylogenetic relationships within the monogeneric Brunelliaceae have
been based on morphological evidence, which does not provide sufficient phylogenetic …
been based on morphological evidence, which does not provide sufficient phylogenetic …
Phylogenomic discordance suggests polytomies along the backbone of the large genus Solanum
Premise Evolutionary studies require solid phylogenetic frameworks, but increased volumes
of phylogenomic data have revealed incongruent topologies among gene trees in many …
of phylogenomic data have revealed incongruent topologies among gene trees in many …
Hybridization and genome duplication for early evolutionary success in the Asian Palmate group of Araliaceae
A Gallego‐Narbón, J Wen, J Liu… - Journal of Systematics …, 2022 - Wiley Online Library
The phenomenal advances in sequencing techniques and analytical development during
the last decade have provided a unique opportunity to unravel the evolutionary history of …
the last decade have provided a unique opportunity to unravel the evolutionary history of …