Mechanisms of lncRNA biogenesis as revealed by nascent transcriptomics
T Nojima, NJ Proudfoot - Nature reviews Molecular cell biology, 2022 - nature.com
Mammalian genomes express two principal gene categories through RNA polymerase II-
mediated transcription: protein-coding transcription units and non-coding RNA transcription …
mediated transcription: protein-coding transcription units and non-coding RNA transcription …
Cis-regulatory sequences in plants: their importance, discovery, and future challenges
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …
function to coordinate responses to developmental and environmental cues is of paramount …
The role of lncRNA-mediated ceRNA regulatory networks in pancreatic cancer
J Xu, J Xu, X Liu, J Jiang - Cell death discovery, 2022 - nature.com
Abstract Non-coding RNAs (ncRNAs), which occupy the vast majority of human transcripts
are known for their inability to encode proteins. NcRNAs consist of a diverse range of RNA …
are known for their inability to encode proteins. NcRNAs consist of a diverse range of RNA …
Genome-wide analysis of human long noncoding RNAs: a provocative review
CP Ponting, W Haerty - Annual review of genomics and human …, 2022 - annualreviews.org
Do long noncoding RNAs (lncRNAs) contribute little or substantively to human biology? To
address how lncRNA loci and their transcripts, structures, interactions, and functions …
address how lncRNA loci and their transcripts, structures, interactions, and functions …
Cohesin-dependence of neuronal gene expression relates to chromatin loop length
Cohesin and CTCF are major drivers of 3D genome organization, but their role in neurons is
still emerging. Here, we show a prominent role for cohesin in the expression of genes that …
still emerging. Here, we show a prominent role for cohesin in the expression of genes that …
Population-level variation in enhancer expression identifies disease mechanisms in the human brain
Identification of risk variants for neuropsychiatric diseases within enhancers underscores the
importance of understanding population-level variation in enhancer function in the human …
importance of understanding population-level variation in enhancer function in the human …
From molecular mechanisms to therapeutics: understanding MicroRNA-21 in cancer
J Rhim, W Baek, Y Seo, JH Kim - Cells, 2022 - mdpi.com
MicroRNAs (miRNAs) are small noncoding RNAs that play an important role in regulating
gene expression at a posttranscriptional level. As one of the first discovered oncogenic …
gene expression at a posttranscriptional level. As one of the first discovered oncogenic …
Targeted epigenomic editing ameliorates adult anxiety and excessive drinking after adolescent alcohol exposure
JP Bohnsack, H Zhang, GM Wandling, D He… - Science …, 2022 - science.org
Adolescent binge drinking is a major risk factor for psychiatric disorders later in life including
alcohol use disorder. Adolescent alcohol exposure induces epigenetic reprogramming at …
alcohol use disorder. Adolescent alcohol exposure induces epigenetic reprogramming at …
Large-scale chromatin reorganization reactivates placenta-specific genes that drive cellular aging
Nuclear deformation, a hallmark frequently observed in senescent cells, is presumed to be
associated with the erosion of chromatin organization at the nuclear periphery. However …
associated with the erosion of chromatin organization at the nuclear periphery. However …
[HTML][HTML] Merging established mechanisms with new insights: condensates, hubs, and the regulation of RNA polymerase II transcription
M Palacio, DJ Taatjes - Journal of Molecular Biology, 2022 - Elsevier
The regulation of RNA polymerase II (pol II) transcription requires a complex and context-
specific array of proteins and protein complexes, as well as nucleic acids and metabolites …
specific array of proteins and protein complexes, as well as nucleic acids and metabolites …