The multi-dimensional biomarker landscape in cancer immunotherapy

JY Lee, B Kannan, BY Lim, Z Li, AH Lim… - International Journal of …, 2022 - mdpi.com
The field of immuno-oncology is now at the forefront of cancer care and is rapidly evolving.
The immune checkpoint blockade has been demonstrated to restore antitumor responses in …

Unravelling prostate cancer heterogeneity using spatial approaches to lipidomics and transcriptomics

SM Mutuku, X Spotbeen, PJ Trim, MF Snel, LM Butler… - Cancers, 2022 - mdpi.com
Simple Summary Prostate cancer is a heterogenous disease in terms of disease
aggressiveness and therapy response, leading to dilemmas in treatment decisions. This …

STOmicsDB: a database of spatial transcriptomic data

Z Xu, W Wang, T Yang, J Chen, Y Huang, J Gould… - bioRxiv, 2022 - biorxiv.org
Recent technological development in spatial transcriptomics allows researchers to measure
gene expression of cells and their spatial locations at the almost single-cell level, which …

Plasticity within aldehyde dehydrogenase–positive cells determines prostate cancer radiosensitivity

FM Schwarz, I Schniewind, MJ Besso, S Lange… - Molecular Cancer …, 2022 - AACR
Tumor heterogeneity and cellular plasticity are key determinants of tumor progression,
metastatic spread, and therapy response driven by the cancer stem cell (CSC) population …

Computational elucidation of spatial gene expression variation from spatially resolved transcriptomics data

K Li, C Yan, C Li, L Chen, J Zhao, Z Zhang… - … Therapy-Nucleic Acids, 2022 - cell.com
Recent advances in spatially resolved transcriptomics (SRT) have revolutionized biological
and medical research and enabled unprecedented insight into the functional organization …

[HTML][HTML] 大数据生态流行病学理论模型诠释

薛付忠 - 中华疾病控制杂志, 2022 - zhjbkz.ahmu.edu.cn
当今, 数字技术作为一种新型的健康决定因素, 它改变了社会, 经济, 城市和家庭,
进而又影响了人类健康; 人类进入了一个全新的数字虚拟世界. 由此, 在大数据生态流行病学理论 …

Automated quantitative high-throughput multiplex immunofluorescence pipeline to evaluate OXPHOS defects in formalin-fixed human prostate tissue

A Sachdeva, CA Hart, CD Carey, AE Vincent… - Scientific Reports, 2022 - nature.com
Advances in multiplex immunofluorescence (mIF) and digital image analysis has enabled
simultaneous assessment of protein defects in electron transport chain components …

Cytocipher detects significantly different populations of cells in single cell RNA-seq data

B Balderson, S Thor, M Boden - bioRxiv, 2022 - biorxiv.org
Identification of novel and known cell types with single cell RNA-seq (scRNA-seq) is
revolutionising the study of multicellular organisms. However, typical scRNA-seq analysis …

Identifying genes with location dependent noise variance in spatial transcriptomics data

MA Abrar, M Kaykobad, MS Rahman, MAH Samee - bioRxiv, 2022 - biorxiv.org
Spatial transcriptomics (ST) holds the promise to identify the existence and extent of spatial
variation of gene expression in complex tissues. Such analyses could help identify gene …

Interpretation of the theoretical model of big data eco-epidemiology

XUE Fu-zhong - 中华疾病控制杂志, 2022 - zhjbkz.ahmu.edu.cn
Nowadays, digital technology has become a new type of health determinant, which not only
changes society, economy, city and family, but also affects human health; human beings …