Antimicrobial resistance monitoring of water environments: a framework for standardized methods and quality control
Antimicrobial resistance (AMR) is a grand societal challenge with important dimensions in
the water environment that contribute to its evolution and spread. Environmental monitoring …
the water environment that contribute to its evolution and spread. Environmental monitoring …
Impacts of farmland application of antibiotic-contaminated manures on the occurrence of antibiotic residues and antibiotic resistance genes in soil: a meta-analysis …
Y Zhang, D Cheng, J Xie, Y Zhang, Y Wan, Y Zhang… - Chemosphere, 2022 - Elsevier
A meta-analysis of 94 published studies was conducted to explore the impacts of farmland
application of antibiotic-contaminated manures on antibiotic concentrations and ARG …
application of antibiotic-contaminated manures on antibiotic concentrations and ARG …
Environmental factors shaping the gut microbiome in a Dutch population
The gut microbiome is associated with diverse diseases,–, but a universal signature of a
healthy or unhealthy microbiome has not been identified, and there is a need to understand …
healthy or unhealthy microbiome has not been identified, and there is a need to understand …
[HTML][HTML] Assessment of global health risk of antibiotic resistance genes
Z Zhang, Q Zhang, T Wang, N Xu, T Lu, W Hong… - Nature …, 2022 - nature.com
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health in
the last decade. Many genes can confer resistance, but evaluating the relative health risks of …
the last decade. Many genes can confer resistance, but evaluating the relative health risks of …
Towards the biogeography of prokaryotic genes
Microbial genes encode the majority of the functional repertoire of life on earth. However,
despite increasing efforts in metagenomic sequencing of various habitats,–, little is known …
despite increasing efforts in metagenomic sequencing of various habitats,–, little is known …
[HTML][HTML] IntegronFinder 2.0: identification and analysis of integrons across bacteria, with a focus on antibiotic resistance in Klebsiella
Integrons are flexible gene-exchanging platforms that contain multiple cassettes encoding
accessory genes whose order is shuffled by a specific integrase. Integrons embedded within …
accessory genes whose order is shuffled by a specific integrase. Integrons embedded within …
A catalogue of 1,167 genomes from the human gut archaeome
The human gut microbiome plays an important role in health, but its archaeal diversity
remains largely unexplored. In the present study, we report the analysis of 1,167 …
remains largely unexplored. In the present study, we report the analysis of 1,167 …
A genome and gene catalog of glacier microbiomes
Glaciers represent a unique inventory of microbial genetic diversity and a record of
evolution. The Tibetan Plateau contains the largest area of low-latitude glaciers and is …
evolution. The Tibetan Plateau contains the largest area of low-latitude glaciers and is …
Codiversification of gut microbiota with humans
The gut microbiomes of human populations worldwide have many core microbial species in
common. However, within a species, some strains can show remarkable population …
common. However, within a species, some strains can show remarkable population …
Strain-level characterization of broad host range mobile genetic elements transferring antibiotic resistance from the human microbiome
Mobile genetic elements (MGEs) carrying antibiotic resistance genes (ARGs) disseminate
ARGs when they mobilise into new bacterial hosts. The nature of such horizontal gene …
ARGs when they mobilise into new bacterial hosts. The nature of such horizontal gene …