Domesticating Vigna stipulacea: Chromosome-Level genome assembly reveals VsPSAT1 as a candidate gene decreasing hard-seededness

Y Takahashi, H Sakai, H Ariga, S Teramoto… - Frontiers in Plant …, 2023 - frontiersin.org
To increase food production under the challenges presented by global climate change, the
concept of de novo domestication—utilizing stress-tolerant wild species as new crops—has …

Genetic population structure of the precious coral Corallium japonicum in the Northwest Pacific

H Kise, A Iguchi, N Saito, Y Yoshioka, K Uda… - Frontiers in Marine …, 2023 - frontiersin.org
We examined the genetic population structure of a precious coral, the Japanese red coral
Corallium japonicum, in the Northwest Pacific. We used restriction-site-associated DNA …

Association analysis of production traits of Japanese quail (Coturnix japonica) using restriction-site associated DNA sequencing

MI Haqani, M Nakano, AJ Nagano, Y Nakamura… - Scientific Reports, 2023 - nature.com
This study was designed to perform an association analysis and identify SNP markers
associated with production traits of Japanese quail using restriction-site-associated DNA …

RAD-Seq analysis of wild Japanese garlic (Allium macrostemon Bunge) growing in Japan revealed that this neglected crop was previously actively utilized

W Probowati, S Koga, K Harada, Y Nagano… - Scientific Reports, 2023 - nature.com
Allium macrostemon Bunge, commonly referred to as" no-biru" in Japan, is a widespread
wild onion species found across the country. Despite being deeply entwined in ancient …

History of the terrestrial isopod genus Ligidium in Japan based on phylogeographic analysis

W Harigai, A Saito, C Zemmoto, S Karasawa… - BMC Ecology and …, 2023 - Springer
Background Phylogeographical approaches explain the genetic diversity of local organisms
in the context of their geological and geographic environments. Thus, genetic diversity can …

Genomic landscape of introgression from the ghost lineage in a gobiid fish uncovers the generality of forces shaping hybrid genomes

S Kato, S Arakaki, AJ Nagano, K Kikuchi… - Molecular …, 2023 - Wiley Online Library
Extinct lineages can leave legacies in the genomes of extant lineages through ancient
introgressive hybridization. The patterns of genomic survival of these extinct lineages …

[HTML][HTML] Development and validation of novel SNP markers for the rapid identification of natural hybrids of the 11 closely related pufferfish species (Takifugu spp.) …

H Takahashi, R Kakioka, AJ Nagano - Aquaculture Reports, 2023 - Elsevier
Accurate identification of interspecific hybrids is vital for breeding programs in hybridizing
taxa, as well as for the use of hybrids in aquaculture and fisheries. The use of species …

The contrary conservation situations of two local critically endangered species, Vaccinium emarginatum (Ericaceae) and Elatostema platyphyllum (Urticaceae) …

M Shibabayashi, T Shimizu, C Tokuhiro… - Frontiers in Ecology …, 2023 - frontiersin.org
As biodiversity loss continues, there is an urgent need to develop efficient conservation
measures to protect diversity with limited conservation resources. Conservation targets have …