Plant pan-genomics and its applications
J Shi, Z Tian, J Lai, X Huang - Molecular Plant, 2023 - cell.com
Plant genomes are so highly diverse that a substantial proportion of genomic sequences are
not shared among individuals. The variable DNA sequences, along with the conserved core …
not shared among individuals. The variable DNA sequences, along with the conserved core …
Modeling plant diseases under climate change: evolutionary perspectives
LN Yang, M Ren, J Zhan - Trends in Plant Science, 2023 - cell.com
Infectious plant diseases are a major threat to global agricultural productivity, economic
development, and ecological integrity. There is widespread concern that these social and …
development, and ecological integrity. There is widespread concern that these social and …
Small genome size and variation in ploidy levels support the naturalization of vascular plants but constrain their invasive spread
Karyological characteristics are among the traits underpinning the invasion success of
vascular plants. Using 11 049 species, we tested the effects of genome size and ploidy …
vascular plants. Using 11 049 species, we tested the effects of genome size and ploidy …
Genomic copy number variability at the genus, species and population levels impacts in situ ecological analyses of dinoflagellates and harmful algal blooms
The application of meta-barcoding, qPCR, and metagenomics to aquatic eukaryotic
microbial communities requires knowledge of genomic copy number variability (CNV). CNV …
microbial communities requires knowledge of genomic copy number variability (CNV). CNV …
From genome size to trait evolution during angiosperm radiation
Angiosperm diversity arises from trait flexibility and repeated evolutionary radiations, but the
role of genomic characters in these radiations remains unclear. In this opinion article, we …
role of genomic characters in these radiations remains unclear. In this opinion article, we …
Sequencing the genomes of the first terrestrial fungal lineages: what have we learned?
The first genome sequenced of a eukaryotic organism was for Saccharomyces cerevisiae,
as reported in 1996, but it was more than 10 years before any of the zygomycete fungi …
as reported in 1996, but it was more than 10 years before any of the zygomycete fungi …
A high-quality Bougainvillea genome provides new insights into evolutionary history and pigment biosynthetic pathways in the Caryophyllales
Bougainvillea is a perennial ornamental shrub that is highly regarded in ornamental
horticulture around the world. However, the absence of genome data limits our …
horticulture around the world. However, the absence of genome data limits our …
Repeat-based phylogenomics shed light on unclear relationships in the monocentric genus Juncus L.(Juncaceae)
Y Mata-Sucre, W Matzenauer, N Castro… - Molecular Phylogenetics …, 2023 - Elsevier
The repetitive fraction (repeatome) of eukaryotic genomes is diverse and usually fast
evolving, being an important tool for clarify plant systematics. The genus Juncus L …
evolving, being an important tool for clarify plant systematics. The genus Juncus L …
Genome size, genetic diversity, and phenotypic variability imply the effect of genetic variation instead of ploidy on trait plasticity in the cross-pollinated tree species of …
Elucidation of genome size (GS), genetic and phenotypic variation is the fundamental aspect
of crop improvement programs. Mulberry is a cross-pollinated, highly heterozygous tree …
of crop improvement programs. Mulberry is a cross-pollinated, highly heterozygous tree …
Genome size variation and polyploidy prevalence in the genus Eragrostis are associated with the global dispersal in arid area
GR Hutang, Y Tong, XG Zhu, LZ Gao - Frontiers in Plant Science, 2023 - frontiersin.org
Background Biologists have long debated the drivers of the genome size evolution and
variation ever since Darwin. Assumptions for the adaptive or maladaptive consequences of …
variation ever since Darwin. Assumptions for the adaptive or maladaptive consequences of …