Breeding crops for drought-affected environments and improved climate resilience

M Cooper, CD Messina - The Plant Cell, 2023 - academic.oup.com
Breeding climate-resilient crops with improved levels of abiotic and biotic stress resistance
as a response to climate change presents both opportunities and challenges. Applying the …

[HTML][HTML] Leveraging data from the Genomes-to-Fields Initiative to investigate genotype-by-environment interactions in maize in North America

M Lopez-Cruz, FM Aguate, JD Washburn… - Nature …, 2023 - nature.com
Genotype-by-environment (G× E) interactions can significantly affect crop performance and
stability. Investigating G× E requires extensive data sets with diverse cultivars tested over …

[HTML][HTML] Design, execution, and interpretation of plant RNA-seq analyses

RN Upton, FH Correr, J Lile, GL Reynolds… - Frontiers in Plant …, 2023 - frontiersin.org
Genomics has transformed our understanding of the genetic architecture of traits and the
genetic variation present in plants. Here, we present a review of how RNA-seq can be …

Diversity and genetic architecture of agro-morphological traits in a core collection of European traditional tomato

C Pons, J Casals, M Brower, A Sacco… - Journal of …, 2023 - academic.oup.com
European traditional tomato varieties have been selected by farmers given their consistent
performance and adaptation to local growing conditions. Here we developed a multipurpose …

[HTML][HTML] Upcycling rice yield trial data using a weather-driven crop growth model

H Shimono, A Abe, CH Kim, C Sato, H Iwata - Communications Biology, 2023 - nature.com
Efficient plant breeding plays a significant role in increasing crop yields and attaining food
security under climate change. Screening new cultivars through yield trials in multi …

Calibration of a crop growth model in APSIM for 15 publicly available corn hybrids in North America

CA Winn, S Archontoulis, J Edwards - Crop Science, 2023 - Wiley Online Library
Application of crop growth models (CGMs) in plant breeding is limited by the large number of
candidate cultivars that breeders work with and the large number of CGM parameters that …

[HTML][HTML] Modeling the influence of phenotypic plasticity on maize hybrid performance

R Fu, X Wang - Plant Communications, 2023 - cell.com
Phenotypic plasticity, the ability of an individual to alter its phenotype in response to
changes in the environment, has been proposed as a target for breeding crop varieties with …

[HTML][HTML] Complex genetic architecture underlying the plasticity of maize agronomic traits

M Jin, H Liu, X Liu, T Guo, J Guo, Y Yin, Y Ji, Z Li… - Plant …, 2023 - cell.com
Phenotypic plasticity is the ability of a given genotype to produce multiple phenotypes in
response to changing environmental conditions. Understanding the genetic basis of …

[HTML][HTML] Genomic prediction and association mapping of maize grain yield in multi-environment trials based on reaction norm models

SA Tolley, LF Brito, DR Wang, MR Tuinstra - Frontiers in Genetics, 2023 - frontiersin.org
Genotype-by-environment interaction (GEI) is among the greatest challenges for maize
breeding programs. Strong GEI limits both the prediction of genotype performance across …

Identification of genomic regions associated with the plasticity of carbon 13 ratio in soybean

SK Chamarthi, AS Kaler, H Abdel‐Haleem… - The Plant …, 2023 - Wiley Online Library
Improving water use efficiency (WUE) for soybean [Glycine max (L.) Merr.] through selection
for high carbon isotope (C13) ratio may increase drought tolerance, but increased WUE may …