Translating virome analyses to support biosecurity, on-farm management, and crop breeding
Virome analysis via high-throughput sequencing (HTS) allows rapid and massive virus
identification and diagnoses, expanding our focus from individual samples to the ecological …
identification and diagnoses, expanding our focus from individual samples to the ecological …
Core-predominant gut fungus Kazachstania slooffiae promotes intestinal epithelial glycolysis via lysine desuccinylation in pigs
J Hu, J Chen, Q Hou, X Xu, J Ren, L Ma, X Yan - Microbiome, 2023 - Springer
Background Gut fungi are increasingly recognized as important contributors to host
physiology, although most studies have focused on gut bacteria. Post-translational …
physiology, although most studies have focused on gut bacteria. Post-translational …
Spatial self-organization of metabolism in microbial systems: a matter of enzymes and chemicals
M Ackermann, S van Vliet - Cell Systems, 2023 - cell.com
Most bacteria live in dense, spatially structured communities such as biofilms. The high
density allows cells to alter the local microenvironment, whereas the limited mobility can …
density allows cells to alter the local microenvironment, whereas the limited mobility can …
Soil and bark biodiversity forms discrete islands between vineyards that are not affected by distance or management regime
Within geographic regions, the existing data suggest that physical habitat (bark, soil, etc.) is
the strongest factor determining agroecosystem microbial community assemblage, followed …
the strongest factor determining agroecosystem microbial community assemblage, followed …
Island area and remoteness shape plant and soil bacterial diversity through land use and biological invasion
Biodiversity is declining dramatically due to human‐driven land use change and biological
invasion, but our knowledge of how such drivers influence plant and heterotroph diversity on …
invasion, but our knowledge of how such drivers influence plant and heterotroph diversity on …
Distinct and temporally stable assembly mechanisms shape bacterial and fungal communities in vineyard soils
Microbial communities in agricultural soils are fundamental for plant growth and in vineyard
ecosystems contribute to defining regional wine quality. Managing soil microbes towards …
ecosystems contribute to defining regional wine quality. Managing soil microbes towards …
Rhizosphere soil microbes benefit carbon and nitrogen sinks under long-term afforestation on the Tibetan Plateau
R Liu, Y Yao, Q Li, Z Cai, D Wei, X Wang, S Zhang - Catena, 2023 - Elsevier
Afforestation enhances the soil carbon (C) and nitrogen (N) sinks, critical for mitigating
global warming and improving the ecological environment, processes that may be mediated …
global warming and improving the ecological environment, processes that may be mediated …
Expanding Antarctic biogeography: microbial ecology of Antarctic island soils
The majority of islands surrounding the Antarctic continent are poorly characterized in terms
of microbial macroecology due to their remote locations, geographical isolation and access …
of microbial macroecology due to their remote locations, geographical isolation and access …
Scale dependency of community assembly differs between coastal marine bacteria and fungi
Y Xu, X Chen, C Graco‐Roza, J Soininen - Ecography, 2023 - Wiley Online Library
It is often assumed that community assembly processes, ie deterministic or stochastic factors
determining the structure of communities, vary with spatial scale. However, evidence …
determining the structure of communities, vary with spatial scale. However, evidence …
e DNA metabarcoding analysis reveals the consequence of creating ecosystem‐scale refugia from deer grazing for the soil microbial communities
K Kadowaki, MN Honjo, N Nakamura… - Environmental …, 2023 - Wiley Online Library
Ungulate overbrowsing is a growing problem in forests worldwide due to its prolonged and
pervasive impact on plant biodiversity and ecosystem functioning. It has been shown that …
pervasive impact on plant biodiversity and ecosystem functioning. It has been shown that …