Pre-mRNA splicing and its cotranscriptional connections
H Shenasa, DL Bentley - Trends in Genetics, 2023 - cell.com
Transcription of eukaryotic genes by RNA polymerase II (Pol II) yields RNA precursors
containing introns that must be spliced out and the flanking exons ligated together. Splicing …
containing introns that must be spliced out and the flanking exons ligated together. Splicing …
[HTML][HTML] Ageing-associated changes in transcriptional elongation influence longevity
C Debès, A Papadakis, S Grönke, Ö Karalay, LS Tain… - Nature, 2023 - nature.com
Physiological homeostasis becomes compromised during ageing, as a result of impairment
of cellular processes, including transcription and RNA splicing,,–. However, the molecular …
of cellular processes, including transcription and RNA splicing,,–. However, the molecular …
Cotranscriptional RNA processing and modification in plants
The activities of RNA polymerases shape the epigenetic landscape of genomes with
profound consequences for genome integrity and gene expression. A fundamental event …
profound consequences for genome integrity and gene expression. A fundamental event …
Human histone H1 variants impact splicing outcome by controlling RNA polymerase II elongation
C Pascal, J Zonszain, O Hameiri, C Gargi-Levi… - Molecular Cell, 2023 - cell.com
Histones shape chromatin structure and the epigenetic landscape. H1, the most diverse
histone in the human genome, has 11 variants. Due to the high structural similarity between …
histone in the human genome, has 11 variants. Due to the high structural similarity between …
[HTML][HTML] eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs
The eQTL Catalogue is an open database of uniformly processed human molecular
quantitative trait loci (QTLs). We are continuously updating the resource to further increase …
quantitative trait loci (QTLs). We are continuously updating the resource to further increase …
LncRNA FLAIL affects alternative splicing and represses flowering in Arabidopsis
How the noncoding genome affects cellular functions is a key biological question. A
particular challenge is to distinguish the effects of noncoding DNA elements from long …
particular challenge is to distinguish the effects of noncoding DNA elements from long …
Systematic analysis of alternative exon-dependent interactome remodeling reveals multitasking functions of gene regulatory factors
Alternative splicing significantly expands biological complexity, particularly in the vertebrate
nervous system. Increasing evidence indicates that developmental and tissue-dependent …
nervous system. Increasing evidence indicates that developmental and tissue-dependent …
[HTML][HTML] Differences in alternative splicing and their potential underlying factors between animals and plants
Y Du, L Cao, S Wang, L Guo, L Tan, H Liu… - Journal of Advanced …, 2023 - Elsevier
Background Alternative splicing (AS), a posttranscriptional process, contributes to the
complexity of transcripts from a limited number of genes in a genome, and AS is considered …
complexity of transcripts from a limited number of genes in a genome, and AS is considered …
[HTML][HTML] The conserved RNA-binding protein Seb1 promotes cotranscriptional ribosomal RNA processing by controlling RNA polymerase I progression
M Duval, C Yague-Sanz, TW Turowski… - Nature …, 2023 - nature.com
Transcription by RNA polymerase I (RNAPI) represents most of the transcriptional activity in
eukaryotic cells and is associated with the production of mature ribosomal RNA (rRNA). As …
eukaryotic cells and is associated with the production of mature ribosomal RNA (rRNA). As …
Splicing factor Prp18p promotes genome-wide fidelity of consensus 3′-splice sites
KR Roy, J Gabunilas, D Neutel, M Ai, Z Yeh… - Nucleic Acids …, 2023 - academic.oup.com
The fidelity of splice site selection is critical for proper gene expression. In particular, proper
recognition of 3′-splice site (3′ SS) sequences by the spliceosome is challenging …
recognition of 3′-splice site (3′ SS) sequences by the spliceosome is challenging …