Chiral induced spin selectivity
Since the initial landmark study on the chiral induced spin selectivity (CISS) effect in 1999,
considerable experimental and theoretical efforts have been made to understand the …
considerable experimental and theoretical efforts have been made to understand the …
G protein-coupled receptors (GPCRs): advances in structures, mechanisms, and drug discovery
M Zhang, T Chen, X Lu, X Lan, Z Chen… - Signal Transduction and …, 2024 - nature.com
G protein-coupled receptors (GPCRs), the largest family of human membrane proteins and
an important class of drug targets, play a role in maintaining numerous physiological …
an important class of drug targets, play a role in maintaining numerous physiological …
Tutorial on how to build non-Markovian dynamic models from molecular dynamics simulations for studying protein conformational changes
Protein conformational changes play crucial roles in their biological functions. In recent
years, the Markov State Model (MSM) constructed from extensive Molecular Dynamics (MD) …
years, the Markov State Model (MSM) constructed from extensive Molecular Dynamics (MD) …
Allosteric drugs: New principles and design approaches
WV Tee, IN Berezovsky - Current Opinion in Structural Biology, 2024 - Elsevier
Focusing on an important biomedical implication of allostery–design of allosteric drugs, we
describe characteristics of allosteric sites, effectors, and their modes of actions …
describe characteristics of allosteric sites, effectors, and their modes of actions …
[HTML][HTML] Probing allosteric communication with combined molecular dynamics simulations and network analysis
Understanding the allosteric mechanisms within biomolecules involved in diseases is of
paramount importance for drug discovery. Indeed, characterizing communication pathways …
paramount importance for drug discovery. Indeed, characterizing communication pathways …
Application of established computational techniques to identify potential SARS-CoV-2 Nsp14-MTase inhibitors in low data regimes
AK Nigam, MFD Hurley, F Li, E Konkoľová, M Klíma… - Digital …, 2024 - pubs.rsc.org
The COVID-19 pandemic, caused by the SARS-CoV-2 virus, has led to significant global
morbidity and mortality. A crucial viral protein, the non-structural protein 14 (nsp14) …
morbidity and mortality. A crucial viral protein, the non-structural protein 14 (nsp14) …
Adaptive Workflows of Machine Learning Illuminate the Sequential Operation Mechanism of the TAK1′ s Allosteric Network
N Ray Chaudhuri, S Ghosh Dastidar - Biochemistry, 2024 - ACS Publications
Allostery is a fundamental mechanism driving biomolecular processes that holds significant
therapeutic concern. Our study rigorously investigates how two distinct machine-learning …
therapeutic concern. Our study rigorously investigates how two distinct machine-learning …
Discovery of a Potential Allosteric Site in the SARS-CoV-2 Spike Protein and Targeting Allosteric Inhibitor to Stabilize the RBD Down State Using a Computational …
T Li, Z Yan, W Zhou, Q Liu, J Liu… - Current Computer-Aided …, 2024 - ingentaconnect.com
Background: The novel coronavirus disease 2019 (COVID-19) caused by severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) has led to a worldwide public health …
respiratory syndrome coronavirus 2 (SARS-CoV-2) has led to a worldwide public health …
A Fresh Look at the Normal Mode Analysis of Proteins: Introducing Allosteric Co-Vibrational Modes
I Kolossváry - JACS Au, 2024 - ACS Publications
We propose a new way of utilizing normal modes to study protein conformational transitions.
Instead of considering individual modes independently, we show that a weighted mixture of …
Instead of considering individual modes independently, we show that a weighted mixture of …
Identification of Orthosteric and Allosteric Pharmacological Chaperones for Mucopolysaccharidosis type IIIB
JC Losada, H Triana, E Venegas, A Caro… - …, 2024 - Wiley Online Library
Mucopolysaccharidosis type IIIB (MPS IIIB) is an autosomal inherited disease caused by
mutations in gene encoding the lysosomal enzyme N‐acetyl‐alpha‐glucosaminidase …
mutations in gene encoding the lysosomal enzyme N‐acetyl‐alpha‐glucosaminidase …