Organoids in COVID-19: can we break the glass ceiling?

CW Chau, R Sugimura - Journal of Leukocyte Biology, 2024 - academic.oup.com
COVID-19 emerged in September 2020 as a disease caused by the virus SARS-CoV-2. The
disease presented as pneumonia at first but later was shown to cause multisystem infections …

Predicting potential SARS-CoV-2 spillover and spillback in animals

ZH Tan, KY Yong, JJ Shu - Journal of Microbiology, Immunology and …, 2024 - Elsevier
Background The COVID-19 pandemic is spreading rapidly around the world, causing
countries to impose lockdowns and efforts to develop vaccines on a global scale. However …

NestedBD: Bayesian inference of phylogenetic trees from single-cell copy number profiles under a birth-death model

Y Liu, M Edrisi, Z Yan, HA Ogilvie… - Algorithms for Molecular …, 2024 - Springer
Copy number aberrations (CNAs) are ubiquitous in many types of cancer. Inferring CNAs
from cancer genomic data could help shed light on the initiation, progression, and potential …

Sampling the Swadesh List to Identify Similar Languages with Tree Spaces

G Ordway, V Patrangenaru - arXiv preprint arXiv:2405.06549, 2024 - arxiv.org
Communication plays a vital role in human interaction. Studying language is a worthwhile
task and more recently has become quantitative in nature with developments of fields like …

Rethinking large scale phylogenomics with PhyloToL 6, a flexible toolkit to enable phylogeny-informed data curation and analysis

AE Cote-L'Heureux, M Leleu, G Ani, R Gawron, LA Katz - bioRxiv, 2024 - biorxiv.org
The bulk of eukaryotic diversity is microbial, with macroscopic lineages such as plants,
animals and fungi nesting among diverse lineages that include amoebae, flagellates …

Microbial evolutionary reconstruction in the presence of mosaic sequences

P Aiewsakun - Phylogenomics, 2024 - Elsevier
Phylogenetic reconstruction is central to many research areas in biology, from evolutionary
biology to genomic epidemiology. Reconstruction of a phylogeny is often done based on …

Impact of COVID-19 on Science and Technology

F Saqib, M Wahid, I Iqbal, AA AL-Huqail… - Post-Pandemic …, 2024 - taylorfrancis.com
In a few months, the COVID-19 outbreak had spread globally. The growing number of
individuals with this condition presents significant problems to existing health care systems …

Evaluation of Two Vaccine Platforms Against SARS-CoV-2 For Veterinary Species

S Pagliarani - 2024 - atrium.lib.uoguelph.ca
The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has, to date, infected
approximately 705 million people worldwide and claimed over 7 million lives. Transmission …

Analysis of the SARS-COV-2 Molecular Sequences Using Bioinformatics Tools

A Tamulewicz, J Uzdowska - Innovations in Biomedical Engineering 2023, 2024 - Springer
The aim of the study was to analyze the amino acid sequences of the SARS-CoV-2
coronavirus and homologous sequences with the use of bioinformatics tools. In result …

Using Computational Tools to Enhance Ortholog Assignment for Genome Dynamics-Based Phylogenetics

S Carmi - 2024 - search.proquest.com
Gene orthology, the relationship of a gene family via a common ancestral gene, is a key
feature in almost any comparative genomic study. Such a relationship not only implies …